CAZyme3D

You are here: Home Cite us: 2025

Entry ID

Information for CAZyme ID: CDS11749.1

Basic Information

GenBank IDCDS11749.1
FamilyAA6
Sequence Length245
UniProt IDA0A077WX06(100,100)Download
Average pLDDT?88.33
CAZy50 ID88200
CAZy50 RepNo, CDS02974.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID688394
KingdomEukaryota
PhylumMucoromycota
ClassMucoromycetes
OrderMucorales
FamilyLichtheimiaceae
GenusLichtheimia
SpeciesLichtheimia ramosa

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MPKVFVLYYS  TYGHVQTLSR  HIRKGLESQG  VEVETYQVPE  TLSEDILEKM  HAPPKSDDPV60
ITVEKLQEAD  GFMLGIPTRF  GTMPAQWKSF  LDATGQLWAS  GALAGKFAGI  FFSTASQHGG120
QESTAWTTIT  YLAHHGINYV  PFGFANTHLF  DNSEVVGGSA  YGAGTVANGD  GSRQPSEKEL180
AIAETQGENF  AKLLNTMHKG  QAPQEKKEQT  VDKPKEAPTT  RAAATPKPAP  KDDEEPKKKN240
KCFCM245

Predicted 3D structure by AlphaFold2 with pLDDT = 88.33 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : AA6(3-194)

MPKVFVLYYS  TYGHVQTLSR  HIRKGLESQG  VEVETYQVPE  TLSEDILEKM  HAPPKSDDPV60
ITVEKLQEAD  GFMLGIPTRF  GTMPAQWKSF  LDATGQLWAS  GALAGKFAGI  FFSTASQHGG120
QESTAWTTIT  YLAHHGINYV  PFGFANTHLF  DNSEVVGGSA  YGAGTVANGD  GSRQPSEKEL180
AIAETQGENF  AKLLNTMHKG  QAPQEKKEQT  VDKPKEAPTT  RAAATPKPAP  KDDEEPKKKN240
KCFCM245

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help