CAZyme3D

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Entry ID

Information for CAZyme ID: CDS09401.1

Basic Information

GenBank IDCDS09401.1
FamilyGT2
Sequence Length804
UniProt IDA0A077WP83(100,100)Download
Average pLDDT?79.26
CAZy50 ID3473
CAZy50 RepNo, QDS69504.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID688394
KingdomEukaryota
PhylumMucoromycota
ClassMucoromycetes
OrderMucorales
FamilyLichtheimiaceae
GenusLichtheimia
SpeciesLichtheimia ramosa

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MIQSPISVTS  TTARPNSTLF  PRYQQHVNRV  STTSTLVDDT  DPNDDITSTR  MHYGRAPTHT60
ARRYATQHVR  LTKGNFVIQR  DVPDDLQQHL  PRKGEEFTRM  RYTAVTCDPD  DFPYKNYTLR120
QQHYGRETEL  FIVITMYNEN  EILFARTMHG  VMKNIAHLCK  QKRCNTWNTD  GWKKVVVAIV180
SDGRKVINKR  VLNMLAAMGI  YQSGVAKSEV  DDRPVTAHLY  EYTTQISFDE  NMVRKGADKG240
LVPVQMLFCL  KEKNAKKINS  HRWFFNAFGP  LLKPNVCVLL  DVGTRPGNVS  IHQLWKTFDL300
HPNVGGACGE  IRAMLGPGCQ  HLINPLVAAQ  NFEYKMSNIL  DKPMESVFGY  ISVLPGAFSA360
YRYAALQNDI  NGHGPLEKYF  KGETLHTDGG  LFEANMYLAE  DRILCFELVA  KKGERWLLQY420
CNSAFAETDV  PDGLPEFISQ  RRRWLNGSFF  AGVYSLWHFR  SMWRSRHSFT  RLVLLTIETL480
YNIISLIFNW  IALGNFYIAF  YFITKSLADD  TVDPFGNGWG  SRLFDAFRYI  YLFVIVVVFI540
CSMGNRPQVA  RWLFIACLTV  FSFLMAYMLF  ASAWLIYKGI  ELAKKDIAWT  DDSGTNIVLA600
LENPGLRNMI  VSVLATYGLY  IVSSLLYRQP  ITIILSFLPY  LILLPGFTNI  LNIYAFCNTH660
DVSWGTKGDN  SISKDLGVVK  KKKTKEGQSD  DDAFEEVLPA  DMLDANTQYK  EALQDLEKKQ720
VEKEPPRKHD  KEDYYRSFRT  YLVLAWIGCN  ALLIALVTST  QYDTLYSDST  GTTYMAFILW780
ANAGLAVFRF  MGSVMYLLLR  LFTS804

Predicted 3D structure by AlphaFold2 with pLDDT = 79.26 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT2(136-298)

MIQSPISVTS  TTARPNSTLF  PRYQQHVNRV  STTSTLVDDT  DPNDDITSTR  MHYGRAPTHT60
ARRYATQHVR  LTKGNFVIQR  DVPDDLQQHL  PRKGEEFTRM  RYTAVTCDPD  DFPYKNYTLR120
QQHYGRETEL  FIVITMYNEN  EILFARTMHG  VMKNIAHLCK  QKRCNTWNTD  GWKKVVVAIV180
SDGRKVINKR  VLNMLAAMGI  YQSGVAKSEV  DDRPVTAHLY  EYTTQISFDE  NMVRKGADKG240
LVPVQMLFCL  KEKNAKKINS  HRWFFNAFGP  LLKPNVCVLL  DVGTRPGNVS  IHQLWKTFDL300
HPNVGGACGE  IRAMLGPGCQ  HLINPLVAAQ  NFEYKMSNIL  DKPMESVFGY  ISVLPGAFSA360
YRYAALQNDI  NGHGPLEKYF  KGETLHTDGG  LFEANMYLAE  DRILCFELVA  KKGERWLLQY420
CNSAFAETDV  PDGLPEFISQ  RRRWLNGSFF  AGVYSLWHFR  SMWRSRHSFT  RLVLLTIETL480
YNIISLIFNW  IALGNFYIAF  YFITKSLADD  TVDPFGNGWG  SRLFDAFRYI  YLFVIVVVFI540
CSMGNRPQVA  RWLFIACLTV  FSFLMAYMLF  ASAWLIYKGI  ELAKKDIAWT  DDSGTNIVLA600
LENPGLRNMI  VSVLATYGLY  IVSSLLYRQP  ITIILSFLPY  LILLPGFTNI  LNIYAFCNTH660
DVSWGTKGDN  SISKDLGVVK  KKKTKEGQSD  DDAFEEVLPA  DMLDANTQYK  EALQDLEKKQ720
VEKEPPRKHD  KEDYYRSFRT  YLVLAWIGCN  ALLIALVTST  QYDTLYSDST  GTTYMAFILW780
ANAGLAVFRF  MGSVMYLLLR  LFTS804

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help