Information for CAZyme ID: CDR38773.1
Basic Information
| GenBank ID | CDR38773.1 |
| Family | GH38 |
| Sequence Length | 1143 |
| UniProt ID | A0A061ANP3(100,100) |
| Average pLDDT? | 93.06 |
| CAZy50 ID | 7704 |
| CAZy50 Rep | No, WAQ81262.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 5286 |
| Kingdom | Eukaryota |
| Phylum | Basidiomycota |
| Class | Microbotryomycetes |
| Order | Sporidiobolales |
| Family | Sporidiobolaceae |
| Genus | Rhodotorula |
| Species | Rhodotorula toruloides |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MAMHGPPSPP SYPMINNDGP RAQHFRGLTL GRLDQFEYSN YPNITSVLFQ HRTDDPQHVQ | 60 |
| FEVWHSPGRE KTPFKEAIRK KFVKAEKGMM LGPSWTNHWF RVTLSPPSSW LTSSHPPERI | 120 |
| QLEFDPSCEA MIFDTEGCPL QGITGGFGID RRVEWLVPRE QWKTGLKIYI EVSNNAMFGN | 180 |
| GSTETNAPPD MNRYYRLNSA DLVVPRMEAW RLLWDFRVIK DLARSLPDRS PLGAKCLEVG | 240 |
| NAIMNTFNPS DLATLSTCRA LAADLFGGEE WTREGGEAKV YDKGRESVTS WAIGNCHIDT | 300 |
| AWLWPFSVTR QKTARSWSTQ LDLIARYPEH RFVASQAQQF KWLEQDYPLL FQKVRKGVQE | 360 |
| GKFIPIGGMW VESDQLLPSG ESLARQFLYG QRYFHSRFGQ YCKTWWLPDS FGYNSASPQI | 420 |
| ARLAGLEFFF TQKLSWSQFN EFPNTSFRWQ GQDKTQMVVH MCPQNTYTAQ ASVDDVLNTW | 480 |
| RNHKSLQSHP TGLLTFGNGD GGGGPLAPML ENLRRCRAVA NNAEMGGGEI PKVHMGEGVD | 540 |
| EFYEDLVERT KEAEKLPVWV GELYLELHRG TATSHGSIKR HNRKTEVLLH DLEFAATLAT | 600 |
| VFNAQTKSGK TYAYPKDEID ALWEDMLLCQ FHDVLPGSAI GMVYEDAEKI YANVTEKGST | 660 |
| LLDAALSALL PGSVSLASYP SSSFGFDSSL AAIDTLALGT RRELVKVPLA AARALDDAAV | 720 |
| QRSADGEAYI LFESTKEGET LIERPVGMEE VMRRANELTS RARSVGDDFV LSTPKLQVTV | 780 |
| TKDGRISSIF DKELERELIL DGKTAGFVIF QDHPLNWDAW DVDAFHLETK KEVDASSVKV | 840 |
| IEDGPLRSSL LATYHYGKSV IKATISLDAA APSTKADALS LVRFDVQVDW HQRHEFLKWE | 900 |
| LPLAITPTGD VATFENQFGL CQRPTHRNTT WQRAQFEVCG HRYADLSEFG YGVALVNDCK | 960 |
| YGHACENSTL RLSLLRAATI PDAEQDQGQH RFSFAVYPHR GAFAESDVPD VARAFNYPLH | 1020 |
| IRRLPGKSSK SPKEGPFFFT GARNVILDTI KRGEDDHFGA KRKGENETVV LRMYEAYGGA | 1080 |
| GKVKLEAKLP EGRKVVKAEI VDLLERPIDS LNVLASDSSP SSHSIDIPRL RAFQILTVRL | 1140 |
| TLA | 1143 |
Predicted 3D structure by AlphaFold2 with pLDDT = 93.06 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH38(292-551)
| MAMHGPPSPP SYPMINNDGP RAQHFRGLTL GRLDQFEYSN YPNITSVLFQ HRTDDPQHVQ | 60 |
| FEVWHSPGRE KTPFKEAIRK KFVKAEKGMM LGPSWTNHWF RVTLSPPSSW LTSSHPPERI | 120 |
| QLEFDPSCEA MIFDTEGCPL QGITGGFGID RRVEWLVPRE QWKTGLKIYI EVSNNAMFGN | 180 |
| GSTETNAPPD MNRYYRLNSA DLVVPRMEAW RLLWDFRVIK DLARSLPDRS PLGAKCLEVG | 240 |
| NAIMNTFNPS DLATLSTCRA LAADLFGGEE WTREGGEAKV YDKGRESVTS WAIGNCHIDT | 300 |
| AWLWPFSVTR QKTARSWSTQ LDLIARYPEH RFVASQAQQF KWLEQDYPLL FQKVRKGVQE | 360 |
| GKFIPIGGMW VESDQLLPSG ESLARQFLYG QRYFHSRFGQ YCKTWWLPDS FGYNSASPQI | 420 |
| ARLAGLEFFF TQKLSWSQFN EFPNTSFRWQ GQDKTQMVVH MCPQNTYTAQ ASVDDVLNTW | 480 |
| RNHKSLQSHP TGLLTFGNGD GGGGPLAPML ENLRRCRAVA NNAEMGGGEI PKVHMGEGVD | 540 |
| EFYEDLVERT KEAEKLPVWV GELYLELHRG TATSHGSIKR HNRKTEVLLH DLEFAATLAT | 600 |
| VFNAQTKSGK TYAYPKDEID ALWEDMLLCQ FHDVLPGSAI GMVYEDAEKI YANVTEKGST | 660 |
| LLDAALSALL PGSVSLASYP SSSFGFDSSL AAIDTLALGT RRELVKVPLA AARALDDAAV | 720 |
| QRSADGEAYI LFESTKEGET LIERPVGMEE VMRRANELTS RARSVGDDFV LSTPKLQVTV | 780 |
| TKDGRISSIF DKELERELIL DGKTAGFVIF QDHPLNWDAW DVDAFHLETK KEVDASSVKV | 840 |
| IEDGPLRSSL LATYHYGKSV IKATISLDAA APSTKADALS LVRFDVQVDW HQRHEFLKWE | 900 |
| LPLAITPTGD VATFENQFGL CQRPTHRNTT WQRAQFEVCG HRYADLSEFG YGVALVNDCK | 960 |
| YGHACENSTL RLSLLRAATI PDAEQDQGQH RFSFAVYPHR GAFAESDVPD VARAFNYPLH | 1020 |
| IRRLPGKSSK SPKEGPFFFT GARNVILDTI KRGEDDHFGA KRKGENETVV LRMYEAYGGA | 1080 |
| GKVKLEAKLP EGRKVVKAEI VDLLERPIDS LNVLASDSSP SSHSIDIPRL RAFQILTVRL | 1140 |
| TLA | 1143 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.