CAZyme3D

You are here: Home Cite us: 2025

Entry ID

Information for CAZyme ID: CDR05825.1

Basic Information

GenBank IDCDR05825.1
FamilyGH13_26
Sequence Length831
UniProt IDA0A060ZIB6(100,100)Download
Average pLDDT?93.01
CAZy50 ID6899
CAZy50 RepNo, AJT63674.3
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID576784
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces iranensis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTADPGTPTA  TYRLQLQPAF  PFAAAERAVP  YLASLGVSHL  HLSPVLEAVP  GSSHGYDVVD60
HSAVRAELGG  EEGLRALART  ARAHGLGLIV  DIVPNHMAAP  APERLNAPLW  GVLREGPESP120
YARWFDIDWR  VHGGKVLLPV  LGGPLGEEWD  RLRVEDGTLR  YYDHAFPLRP  GTEGLPLAEL180
LDAQWYRLGW  WRLARTELNY  RRFFTISELI  AVRVEDPEVF  DATHATLLEL  VRDGVVDGLR240
IDHPDGLADP  EGYLRRLDRA  VRAAASEGDI  GQRTAPERGG  ARWTVVEKIL  ARDERLPATW300
PVAGTTGYDA  LHHIDGLFVD  PDGLEKLTAL  YRAFAAPPAD  LGGDWAATVR  RAAHEVVTHE360
LAAEVERLTR  TASRICAADP  RLRDHAPWAL  RTAIRELLVR  LPVYRPYAAV  GGPPATDADA420
VMLRSAAADA  REAFRVAQEA  RVVRVVRDAA  LGGLGDGPDH  RDFCARFAQT  AAALRAKSVE480
DTAFYRYTPL  LSAAEVGGDP  GRPAVAPEEF  HAFAARRSTD  WPATGTVLST  HDTKRSADAR540
ARLAALTESP  GWWGRTVEEL  TRSAPAPDPQ  LAWTAWQTAL  ALGHGDPERL  VPAVLKAVRE600
AGLRTTWTER  NAAYEAEVTA  FLEAGPCAAD  PSVWAAIGAE  LDGPARANAL  GAALLQLTMP660
GVPDLYMGTE  HVYTALVDPD  NRRPTELGGE  PTDGPSAEKL  LLTRAALNLR  RAHPEWFGPG720
STYTPLLASG  PSAEHCVAFL  RTDSSPDGMD  STDGGMGSTD  GMDSTGGTPG  GAVTVVTRLS780
RRLAEAGGWG  AARLPLPPGR  WRDLLTGRTA  EGSAALDELL  SRLPVALLVR  I831

Predicted 3D structure by AlphaFold2 with pLDDT = 93.01 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH13_26(29-316)

MTADPGTPTA  TYRLQLQPAF  PFAAAERAVP  YLASLGVSHL  HLSPVLEAVP  GSSHGYDVVD60
HSAVRAELGG  EEGLRALART  ARAHGLGLIV  DIVPNHMAAP  APERLNAPLW  GVLREGPESP120
YARWFDIDWR  VHGGKVLLPV  LGGPLGEEWD  RLRVEDGTLR  YYDHAFPLRP  GTEGLPLAEL180
LDAQWYRLGW  WRLARTELNY  RRFFTISELI  AVRVEDPEVF  DATHATLLEL  VRDGVVDGLR240
IDHPDGLADP  EGYLRRLDRA  VRAAASEGDI  GQRTAPERGG  ARWTVVEKIL  ARDERLPATW300
PVAGTTGYDA  LHHIDGLFVD  PDGLEKLTAL  YRAFAAPPAD  LGGDWAATVR  RAAHEVVTHE360
LAAEVERLTR  TASRICAADP  RLRDHAPWAL  RTAIRELLVR  LPVYRPYAAV  GGPPATDADA420
VMLRSAAADA  REAFRVAQEA  RVVRVVRDAA  LGGLGDGPDH  RDFCARFAQT  AAALRAKSVE480
DTAFYRYTPL  LSAAEVGGDP  GRPAVAPEEF  HAFAARRSTD  WPATGTVLST  HDTKRSADAR540
ARLAALTESP  GWWGRTVEEL  TRSAPAPDPQ  LAWTAWQTAL  ALGHGDPERL  VPAVLKAVRE600
AGLRTTWTER  NAAYEAEVTA  FLEAGPCAAD  PSVWAAIGAE  LDGPARANAL  GAALLQLTMP660
GVPDLYMGTE  HVYTALVDPD  NRRPTELGGE  PTDGPSAEKL  LLTRAALNLR  RAHPEWFGPG720
STYTPLLASG  PSAEHCVAFL  RTDSSPDGMD  STDGGMGSTD  GMDSTGGTPG  GAVTVVTRLS780
RRLAEAGGWG  AARLPLPPGR  WRDLLTGRTA  EGSAALDELL  SRLPVALLVR  I831

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help