CAZyme3D

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Entry ID

Information for CAZyme ID: CDP29676.1

Basic Information

GenBank IDCDP29676.1
FamilyAA3_2
Sequence Length637
UniProt IDA0A090CLW7(100,100)Download
Average pLDDT?91.83
CAZy50 ID10815
CAZy50 RepNo, QMW25940.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID515849
KingdomEukaryota
PhylumAscomycota
ClassSordariomycetes
OrderSordariales
FamilyPodosporaceae
GenusPodospora
SpeciesPodospora anserina

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MLLSWLSFTA  AVASAARIPP  RQSQQPNHVL  EDFVNRLRNL  IPDSLGGLTP  VLGTSTEYEY60
VVVGAGTAGT  TLAVRLAQSG  ARVALVEAGS  YYDLTNPIIS  STPGLDVLLI  GSDPLNSNPL120
VDWNFVAKNQ  PGTNFRDIHF  ARGKCVGGSS  ALNFMIYQRP  TVQSMQLWAD  SVNDSSYTFS180
NTLPYFQKSV  QFTPPNMNKR  FANSTPGYNA  AAFPATSNNP  LHVSFANYAQ  SFSTWLKAGF240
ATIGIGETPD  FNSGSLMGAQ  YCTSTIRPVD  QTRSSSASSF  LKTALVNNLF  NLKVYTATRA300
EKILFNSNKK  ATGVRVKTGL  VSYTLSASKE  VIISAGAFHS  PQLLMVSGIG  SADQLQAHNI360
PILSNLPGVG  QNMWDHPTFG  PSYPVDLITL  TKEARDPIYL  AEQLVQYTTN  QSGTLTNPVA420
DFLAWEKIPP  PLRQTQFSPS  TQAKLAQFPP  DWPEVEYISG  AGFVGDFSNF  LLVQPSDGRQ480
YATILNVLNT  PLSRGNVTIT  SASTADLPVI  NPAWLTDRAD  QELAVAAYKR  ARQAFTSSGL540
APIVAGEEAY  PGPGVQSDGE  ILEAIRNSLM  TLWHPACTCK  MGREGDPMAV  LDSKARVRGV600
SGLRVVDASS  FPILPPGHPQ  STVYMLAEKI  ADDILQG637

Predicted 3D structure by AlphaFold2 with pLDDT = 91.83 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : AA3_2(57-636)

MLLSWLSFTA  AVASAARIPP  RQSQQPNHVL  EDFVNRLRNL  IPDSLGGLTP  VLGTSTEYEY60
VVVGAGTAGT  TLAVRLAQSG  ARVALVEAGS  YYDLTNPIIS  STPGLDVLLI  GSDPLNSNPL120
VDWNFVAKNQ  PGTNFRDIHF  ARGKCVGGSS  ALNFMIYQRP  TVQSMQLWAD  SVNDSSYTFS180
NTLPYFQKSV  QFTPPNMNKR  FANSTPGYNA  AAFPATSNNP  LHVSFANYAQ  SFSTWLKAGF240
ATIGIGETPD  FNSGSLMGAQ  YCTSTIRPVD  QTRSSSASSF  LKTALVNNLF  NLKVYTATRA300
EKILFNSNKK  ATGVRVKTGL  VSYTLSASKE  VIISAGAFHS  PQLLMVSGIG  SADQLQAHNI360
PILSNLPGVG  QNMWDHPTFG  PSYPVDLITL  TKEARDPIYL  AEQLVQYTTN  QSGTLTNPVA420
DFLAWEKIPP  PLRQTQFSPS  TQAKLAQFPP  DWPEVEYISG  AGFVGDFSNF  LLVQPSDGRQ480
YATILNVLNT  PLSRGNVTIT  SASTADLPVI  NPAWLTDRAD  QELAVAAYKR  ARQAFTSSGL540
APIVAGEEAY  PGPGVQSDGE  ILEAIRNSLM  TLWHPACTCK  MGREGDPMAV  LDSKARVRGV600
SGLRVVDASS  FPILPPGHPQ  STVYMLAEKI  ADDILQG637

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help