CAZyme3D

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Entry ID

Information for CAZyme ID: CDM85272.1

Basic Information

GenBank IDCDM85272.1
FamilyGT96
Sequence Length815
UniProt IDA0A077S2E4(100,100)Download
Average pLDDT?82.21
CAZy50 ID5132
CAZy50 RepNo, ERN13624.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID4565
KingdomEukaryota
PhylumStreptophyta
ClassMagnoliopsida
OrderPoales
FamilyPoaceae
GenusTriticum
SpeciesTriticum aestivum

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MAAAALLLLL  LLWPAVVVSA  AGEGRRLHTL  FSVECGDYFD  WQAVGLLHSL  RKAGQPGGVT60
RLLSCAPDQL  ASYRGLRIGH  TLQVPSYSRH  PRTGDWYPAI  NKPAGVVHWL  EHSPEADNVD120
WVVILDADQI  VRGPIIPWEL  GAEKGKPVAA  YYGYLKGCDN  ILAQLHTAHP  EFCDKVGGIL180
IMHIDDLRAL  APLWLSKTEE  VRQDKSHWST  NITGDIYGMG  WISEMYGYSF  GAAEVGLRHK240
INDDIMIYPG  YTPRIGTEPL  ILHYGLPFKV  GNWSFSKLEH  HEDDIVYDCN  RLFPPPPFPR300
EVEVMESDPN  VKRALYLSIE  CIHTLNEGLL  LHHTSVGCPK  PQWSKYLSFL  KSKRFSELTK360
PKYWNSLKVE  NKLTVQHVAL  SKSRHPKIHT  LFSTECSSYF  DWQTVGLMHS  FRISGQPGNI420
TRLLSCTDED  LKNYKGRDLA  PTHYVPSMNR  HPLTGDWYPA  INKPAAVLHW  INHVQTDAEF480
IVILDADMIM  RGPITPWEYG  AKLGHPVSTP  YDYLIGCDNI  LAKIHTRNPS  ACEKVGGVII540
MHIDDLRRFA  MLWLHKSEEV  RADKDHYATN  ITGDIYASGW  ISEMYGYSFA  AAELNLRHII600
RSDILIYPGY  VPMPGANYKV  FHYGLRFGVG  DWSFDKADWR  NADIVNTCWA  KFPEPPDPSA660
ITKGDQNARE  RDLLSIECGK  ALNKALYLHH  KRRNCPRLST  TIGSISKKME  EVLTSNKSER720
VTQRSSTTTI  GRNVEHMDVT  RQQAVERATD  TVSGVHRSKR  LARSSKMWIF  AVWATSVVVF780
LLVISMFFSE  RRRSISRSRA  SRSQKAHSLT  IKQTV815

Predicted 3D structure by AlphaFold2 with pLDDT = 82.21 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT96(27-329)+GT96(388-686)

MAAAALLLLL  LLWPAVVVSA  AGEGRRLHTL  FSVECGDYFD  WQAVGLLHSL  RKAGQPGGVT60
RLLSCAPDQL  ASYRGLRIGH  TLQVPSYSRH  PRTGDWYPAI  NKPAGVVHWL  EHSPEADNVD120
WVVILDADQI  VRGPIIPWEL  GAEKGKPVAA  YYGYLKGCDN  ILAQLHTAHP  EFCDKVGGIL180
IMHIDDLRAL  APLWLSKTEE  VRQDKSHWST  NITGDIYGMG  WISEMYGYSF  GAAEVGLRHK240
INDDIMIYPG  YTPRIGTEPL  ILHYGLPFKV  GNWSFSKLEH  HEDDIVYDCN  RLFPPPPFPR300
EVEVMESDPN  VKRALYLSIE  CIHTLNEGLL  LHHTSVGCPK  PQWSKYLSFL  KSKRFSELTK360
PKYWNSLKVE  NKLTVQHVAL  SKSRHPKIHT  LFSTECSSYF  DWQTVGLMHS  FRISGQPGNI420
TRLLSCTDED  LKNYKGRDLA  PTHYVPSMNR  HPLTGDWYPA  INKPAAVLHW  INHVQTDAEF480
IVILDADMIM  RGPITPWEYG  AKLGHPVSTP  YDYLIGCDNI  LAKIHTRNPS  ACEKVGGVII540
MHIDDLRRFA  MLWLHKSEEV  RADKDHYATN  ITGDIYASGW  ISEMYGYSFA  AAELNLRHII600
RSDILIYPGY  VPMPGANYKV  FHYGLRFGVG  DWSFDKADWR  NADIVNTCWA  KFPEPPDPSA660
ITKGDQNARE  RDLLSIECGK  ALNKALYLHH  KRRNCPRLST  TIGSISKKME  EVLTSNKSER720
VTQRSSTTTI  GRNVEHMDVT  RQQAVERATD  TVSGVHRSKR  LARSSKMWIF  AVWATSVVVF780
LLVISMFFSE  RRRSISRSRA  SRSQKAHSLT  IKQTV815

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help