CAZyme3D

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Entry ID

Information for CAZyme ID: CCK27246.1

Basic Information

GenBank IDCCK27246.1
FamilyCBM11, GH3
Sequence Length1002
UniProt IDK4QTZ2(100,100)Download
Average pLDDT?93.26
CAZy50 ID2419
CAZy50 RepNo, VEH27113.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1214101
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces davaonensis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MPRTALLVST  ALLAALVPLS  SASAVDDPAP  APVPVDRFEG  EIPFASPPAE  GIFTWGSDND60
DPPTLRIGAR  EDAPEGEKVL  SGTYDISGYG  GFTHDFAFDQ  PAHNWSASKG  IRFWWDGQNN120
GKKIAFELKD  GGANGEASEL  WQTTFTDDFT  GWKQIEIPFT  DFVYRTDYQP  VGGIDQILGL180
TEMWGYAVTL  PVGTPGEFAM  DGVELYGKAD  QSLRASVTTD  AAVYPVTEGG  TATVRVTLAT240
TGSAPVDEPV  TVAYETTGGS  ASGDDYTPVK  GEFTFPAGTV  SGTTRAVQVR  TLKDKAAESA300
ETVPLKLTVT  GAKPPTENPQ  IVVDAHGLPY  LNSKLPVKKR  VADLIGRMSL  AEKAGQMTQA360
ERGAMGKPGD  IAAYDLGSLL  SGGGSTPTPN  TAEAWAKMID  SYQLRAQATR  FQIPLIYGVD420
AVHGHNNLVG  ATIMPHNIGI  GATRDSRLAH  EAGAVTAAEV  RATGVPWDFA  PCLCVTRDER480
WGRSYEAFGE  DPALVESMET  VIQGLQGRAD  GRDLDRDDKV  LATAKHFVGD  GGTEYGSSTT540
GTYTIDQGVT  KVTRQELEAV  HLTPFEEAVD  RGVGTVMPSY  SSLDLIGDGQ  GPVKMHARAD600
MINGALKGRM  DFEGFVISDW  NGIDQIPGDY  TSDVRTSVNA  GVDMVMAPYS  YKEFHSALVS660
EATAGRITEQ  RIDDAVSRIL  TQKFRLGLFE  EPYADTSGAA  EIGSAEHRAV  AREAAAKSQV720
LLKNERNLLP  LKKSQKVYVA  GSNADDLGNQ  TGGWTITWQG  SSGDITEGTT  ILEAMRKNSP780
GLTYSKDASA  PTDGHAVGVV  VVGETPYAEG  IGDVGNGNDL  VLSAADQAAV  DKVCAAMTCA840
VLTVSGRPQL  LGAERLGEVD  ALVASWLPGT  EGDGVADVLY  GKRPFTGQLP  VTWPKSEAQL900
PINVGDASYD  PQFPYGWGLT  TLTKVPEGGT  TTLRALGVAA  AVAERAGAEE  AGRALVTKAR960
LIVQQKSVTP  ASAKPFAEAD  RLLTQGRYGA  AVERLTAAYR  AG1002

Predicted 3D structure by AlphaFold2 with pLDDT = 93.26 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM11(50-207)+GH3(406-646)

MPRTALLVST  ALLAALVPLS  SASAVDDPAP  APVPVDRFEG  EIPFASPPAE  GIFTWGSDND60
DPPTLRIGAR  EDAPEGEKVL  SGTYDISGYG  GFTHDFAFDQ  PAHNWSASKG  IRFWWDGQNN120
GKKIAFELKD  GGANGEASEL  WQTTFTDDFT  GWKQIEIPFT  DFVYRTDYQP  VGGIDQILGL180
TEMWGYAVTL  PVGTPGEFAM  DGVELYGKAD  QSLRASVTTD  AAVYPVTEGG  TATVRVTLAT240
TGSAPVDEPV  TVAYETTGGS  ASGDDYTPVK  GEFTFPAGTV  SGTTRAVQVR  TLKDKAAESA300
ETVPLKLTVT  GAKPPTENPQ  IVVDAHGLPY  LNSKLPVKKR  VADLIGRMSL  AEKAGQMTQA360
ERGAMGKPGD  IAAYDLGSLL  SGGGSTPTPN  TAEAWAKMID  SYQLRAQATR  FQIPLIYGVD420
AVHGHNNLVG  ATIMPHNIGI  GATRDSRLAH  EAGAVTAAEV  RATGVPWDFA  PCLCVTRDER480
WGRSYEAFGE  DPALVESMET  VIQGLQGRAD  GRDLDRDDKV  LATAKHFVGD  GGTEYGSSTT540
GTYTIDQGVT  KVTRQELEAV  HLTPFEEAVD  RGVGTVMPSY  SSLDLIGDGQ  GPVKMHARAD600
MINGALKGRM  DFEGFVISDW  NGIDQIPGDY  TSDVRTSVNA  GVDMVMAPYS  YKEFHSALVS660
EATAGRITEQ  RIDDAVSRIL  TQKFRLGLFE  EPYADTSGAA  EIGSAEHRAV  AREAAAKSQV720
LLKNERNLLP  LKKSQKVYVA  GSNADDLGNQ  TGGWTITWQG  SSGDITEGTT  ILEAMRKNSP780
GLTYSKDASA  PTDGHAVGVV  VVGETPYAEG  IGDVGNGNDL  VLSAADQAAV  DKVCAAMTCA840
VLTVSGRPQL  LGAERLGEVD  ALVASWLPGT  EGDGVADVLY  GKRPFTGQLP  VTWPKSEAQL900
PINVGDASYD  PQFPYGWGLT  TLTKVPEGGT  TTLRALGVAA  AVAERAGAEE  AGRALVTKAR960
LIVQQKSVTP  ASAKPFAEAD  RLLTQGRYGA  AVERLTAAYR  AG1002

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help