CAZyme3D

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Entry ID

Information for CAZyme ID: CCG23501.1

Basic Information

GenBank IDCCG23501.1
FamilyCBM18, GH16_19
Sequence Length461
UniProt IDH8X5P3(100,100)Download
Average pLDDT?78.49
CAZy50 ID370
CAZy50 RepNo, QWU86090.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1136231
KingdomEukaryota
PhylumAscomycota
ClassSaccharomycetes
OrderSaccharomycetales
FamilyDebaryomycetaceae
GenusCandida
SpeciesCandida orthopsilosis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MRAIYVLFLT  LLSVTIASDV  VSCNATQSCP  EDSPCCSQFG  ECGTGAYCLG  GCDIRYSYNL60
TACMPMPRMD  DYSKTFNSKS  AVQEIELANE  YLGNATEADW  VYTGWVDYYN  SSLLLQMPNH120
TTGTVLSSTK  YLWYGKVSAT  MKTSHGGGVV  TAFILFSDVQ  DEIDYEFVGY  NLQAAESNFY180
AQGILNYTNS  KNSTVNDTFE  YYHLYEMDWH  EDHITWSIDN  KAIRTLNRND  TWNETTKRYD240
FPQTPSRIQF  SLWPGGDSSN  GVGTIEWAGG  EIDWDAEDIK  KYGYFYAHIK  EIDVETYDLP300
GNVSLSGNSS  NADDYHAFLY  DSTDGDESNI  YLTNKKTWLG  NDDATGFDPD  NDRDTQNENE360
TTTIVKTSGS  STITSVQTST  KKVSANAPAQ  NTAAANKASA  TQEATTTDYD  PSAGVGGFVQ420
NSKETSSGDS  SSSGGAAGMN  LEVGKEGVLF  AIALGFISYF  V461

Predicted 3D structure by AlphaFold2 with pLDDT = 78.49 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH16_19(103-273)

MRAIYVLFLT  LLSVTIASDV  VSCNATQSCP  EDSPCCSQFG  ECGTGAYCLG  GCDIRYSYNL60
TACMPMPRMD  DYSKTFNSKS  AVQEIELANE  YLGNATEADW  VYTGWVDYYN  SSLLLQMPNH120
TTGTVLSSTK  YLWYGKVSAT  MKTSHGGGVV  TAFILFSDVQ  DEIDYEFVGY  NLQAAESNFY180
AQGILNYTNS  KNSTVNDTFE  YYHLYEMDWH  EDHITWSIDN  KAIRTLNRND  TWNETTKRYD240
FPQTPSRIQF  SLWPGGDSSN  GVGTIEWAGG  EIDWDAEDIK  KYGYFYAHIK  EIDVETYDLP300
GNVSLSGNSS  NADDYHAFLY  DSTDGDESNI  YLTNKKTWLG  NDDATGFDPD  NDRDTQNENE360
TTTIVKTSGS  STITSVQTST  KKVSANAPAQ  NTAAANKASA  TQEATTTDYD  PSAGVGGFVQ420
NSKETSSGDS  SSSGGAAGMN  LEVGKEGVLF  AIALGFISYF  V461

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help