Information for CAZyme ID: CCF82162.1
Basic Information
GenBank ID | CCF82162.1 |
Family | CBM11, GH26, GH5_25 |
Sequence Length | 900 |
UniProt ID | H6SHY4(100,100)![]() |
Average pLDDT? | 86.08 |
CAZy50 ID | 19402 |
CAZy50 Rep | No, AAA23225.1 |
Structure Cluster | - |
EC Number(s) | 3.2.1.4 | 3.2.1.8 |
Substrates(s) | xylan | beta-glucan |
Taxonomy
Tax ID | 1515 |
Kingdom | Bacteria |
Phylum | Bacillota |
Class | Clostridia |
Order | Eubacteriales |
Family | Oscillospiraceae |
Genus | Acetivibrio |
Species | Acetivibrio thermocellus |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MKKRLLVSFL VLSIIVGLLS FQSLGNYNSG LKIGAWVGTQ PSESAIKSFQ ELQGRKLDIV | 60 |
HQFINWSTDF SWVRPYADAV YNNGSILMIT WEPWEYNTVD IKNGKADAYI TRMAQDMKAY | 120 |
GKEIWLRPLH EANGDWYPWA IGYSSRVNTN ETYIAAFRHI VDIFRANGAT NVKWVFNVNC | 180 |
DNVGNGTSYL GHYPGDNYVD YTSIDGYNWG TTQSWGSQWQ SFDQVFSRAY QALASINKPI | 240 |
IIAEFASAEI GGNKARWITE AYNSIRTSYN KVIAAVWFHE NKETDWRINS SPEALAAYRE | 300 |
AIGAGSSNPT PTPTWTSTPP SSSPKAVDPF EMVRKMGMGT NLGNTLEAPY EGSWSKSAME | 360 |
YYFDDFKAAG YKNVRIPVRW DNHTMRTYPY TIDKAFLDRV EQVVDWSLSR GFVTIINSHH | 420 |
DDWIKEDYNG NIERFEKIWE QIAERFKNKS ENLLFEIMNE PFGNITDEQI DDMNSRILKI | 480 |
IRKTNPTRIV IIGGGYWNSY NTLVNIKIPD DPYLIGTFHY YDPYEFTHKW RGTWGTQEDM | 540 |
DTVVRVFDFV KSWSDRNNIP VYFGEFAVMA YADRTSRVKW YDFISDAALE RGFACSVWDN | 600 |
GVFGSLDNDM AIYNRDTRTF DTEILNALFN PGTYPSYSPK PSPTPRPTKP PVTPAVGEKM | 660 |
LDDFEGVLNW GSYSGEGAKV STKIVSGKTG NGMEVSYTGT TDGYWGTVYS LPDGDWSKWL | 720 |
KISFDIKSVD GSANEIRFMI AEKSINGVGD GEHWVYSITP DSSWKTIEIP FSSFRRRLDY | 780 |
QPPGQDMSGT LDLDNIDSIH FMYANNKSGK FVVDNIKLIG ATSDPTPSIK HGDLNFDNAV | 840 |
NSTDLLMLKR YILKSLELGT SEQEEKFKKA ADLNRDNKVD STDLTILKRY LLKAISEIPI | 900 |
900 |
Predicted 3D structure by AlphaFold2 with pLDDT = 86.08 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH26(103-273)+GH5_25(352-599)+CBM11(661-820)+dockerin(833-853)+dockerin(872-892)
0 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.