CAZyme3D

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Entry ID

Information for CAZyme ID: CCD53610.1

Basic Information

GenBank IDCCD53610.1
FamilyGH72
Sequence Length436
UniProt IDG2YPR2(100,100)Download
Average pLDDT?85.34
CAZy50 ID68365
CAZy50 RepNo, SMQ45165.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID999810
KingdomEukaryota
PhylumAscomycota
ClassLeotiomycetes
OrderHelotiales
FamilySclerotiniaceae
GenusBotrytis
SpeciesBotrytis cinerea

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MFSKSVARAG  LIASLAITTV  NAIATISVTG  SKFFTSDGDQ  FFVKGVAYQL  TEADPLIDTN60
QCQLDASLMK  TLGANAIRVY  HVDPSGDHSG  CMTAFADAGV  YLFLDLDTFN  TAITPTDATW120
NESQYTAFSK  VMDAFAKFDN  TLGFFVGNEV  IATNNQSLAA  PFIKAAARDM  KAYRASKGYR180
EIPVGYSAAD  IAELRPMLQN  YLACGTNSSE  AIDFFGLNAY  EWCGDSDFST  SGYKTLNTYA240
EGYNIPIFFS  ETGCNTVKPR  TFQDQAAILG  SDMDDQWSGA  IVYEWIEEAN  DYGLISYGPT300
VAATAVATNV  AGGFSRGGTP  TPVSPDFANL  QSQWSTLTPT  GVASSAYSPT  LTPPACPSST360
SGGWLVDGDV  KLPSIGQKEA  TGTATTTSGS  ASTTGSATGS  AASATSTKKG  SASGGKEITG420
MSVGLAAVMF  GFMYWL436

Predicted 3D structure by AlphaFold2 with pLDDT = 85.34 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH72(21-298)

MFSKSVARAG  LIASLAITTV  NAIATISVTG  SKFFTSDGDQ  FFVKGVAYQL  TEADPLIDTN60
QCQLDASLMK  TLGANAIRVY  HVDPSGDHSG  CMTAFADAGV  YLFLDLDTFN  TAITPTDATW120
NESQYTAFSK  VMDAFAKFDN  TLGFFVGNEV  IATNNQSLAA  PFIKAAARDM  KAYRASKGYR180
EIPVGYSAAD  IAELRPMLQN  YLACGTNSSE  AIDFFGLNAY  EWCGDSDFST  SGYKTLNTYA240
EGYNIPIFFS  ETGCNTVKPR  TFQDQAAILG  SDMDDQWSGA  IVYEWIEEAN  DYGLISYGPT300
VAATAVATNV  AGGFSRGGTP  TPVSPDFANL  QSQWSTLTPT  GVASSAYSPT  LTPPACPSST360
SGGWLVDGDV  KLPSIGQKEA  TGTATTTSGS  ASTTGSATGS  AASATSTKKG  SASGGKEITG420
MSVGLAAVMF  GFMYWL436

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help