Information for CAZyme ID: CCA60030.1
Basic Information
GenBank ID | CCA60030.1 |
Family | CBM13, GH62 |
Sequence Length | 491 |
UniProt ID | F2RHT6(100,100)![]() |
Average pLDDT? | 91.58 |
CAZy50 ID | 22371 |
CAZy50 Rep | No, CCK27711.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 953739 |
Kingdom | Bacteria |
Phylum | Actinomycetota |
Class | Actinomycetes |
Order | Kitasatosporales |
Family | Streptomycetaceae |
Genus | Streptomyces |
Species | Streptomyces venezuelae |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MRFRRPPLVL SLVLAVLSSL LLGASLLSAP PAAAATVDTN AWYVLVNRNS GKALDVHNLA | 60 |
TGDGARITQW TRNDQNQQQW QFVASGDGYY RLKSRHSGKV LDVQNSSTAN GGAIVQWTDA | 120 |
NGTNQQWRLA DSADGHIRLV ARHSGKALEV QGGSTADNAN IVQYDDWGGA NQQWQLVKVG | 180 |
GGTPGTCALP STYRWSSTGA LAQPKAGWAS LKDFTVAPHN GKHLVYATTH GTTASGVGWG | 240 |
SMNFTPFTDW SQMASTGQNT MANRVVAPTL FYFAPKNIWV LAYQWGRTAF SYRTSTDPAN | 300 |
PNGWSAEQEL FSGSITGSGT GPIDQTLIGD GTNMYLFFAG DNGKIYRASM PIGNFPGSFG | 360 |
SSYTTIMSDT EKNLFEAPQV YKVKDQNQYL MIVEARGASE HRYFRSFTAT SLSGSWTPQA | 420 |
ATESNPFAGK ANSGAIWTND ISHGELIRAG ADQTFTIDPC NLQFLYQGRD PNSGGDYGQW | 480 |
AYRPGLLTLQ R | 491 |
Predicted 3D structure by AlphaFold2 with pLDDT = 91.58 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM13(43-178)+GH62(187-461)
MRFRRPPLVL SLVLAVLSSL LLGASLLSAP PAAAATVDTN AWYVLVNRNS GKALDVHNLA | 60 |
TGDGARITQW TRNDQNQQQW QFVASGDGYY RLKSRHSGKV LDVQNSSTAN GGAIVQWTDA | 120 |
NGTNQQWRLA DSADGHIRLV ARHSGKALEV QGGSTADNAN IVQYDDWGGA NQQWQLVKVG | 180 |
GGTPGTCALP STYRWSSTGA LAQPKAGWAS LKDFTVAPHN GKHLVYATTH GTTASGVGWG | 240 |
SMNFTPFTDW SQMASTGQNT MANRVVAPTL FYFAPKNIWV LAYQWGRTAF SYRTSTDPAN | 300 |
PNGWSAEQEL FSGSITGSGT GPIDQTLIGD GTNMYLFFAG DNGKIYRASM PIGNFPGSFG | 360 |
SSYTTIMSDT EKNLFEAPQV YKVKDQNQYL MIVEARGASE HRYFRSFTAT SLSGSWTPQA | 420 |
ATESNPFAGK ANSGAIWTND ISHGELIRAG ADQTFTIDPC NLQFLYQGRD PNSGGDYGQW | 480 |
AYRPGLLTLQ R | 491 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.