Information for CAZyme ID: CBY80877.1
Basic Information
| GenBank ID | CBY80877.1 |
| Family | GT41 |
| Sequence Length | 615 |
| UniProt ID | E7A4A1(100,100) |
| Average pLDDT? | 96.12 |
| CAZy50 ID | 38298 |
| CAZy50 Rep | No, VEI58672.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 866630 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Haemophilus |
| Species | Haemophilus influenzae |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MLQESQPSIN RLEKAIVDKN YEVACSELLK ILEKIDANFG DINEIEFDFP EQISDLLEKR | 60 |
| TQYFCTRIAN AVTNLFIDPN LMLSESGALR FIAFQRWLAL IFASSPYVNA DHILKTYNTN | 120 |
| SDILGDIHLN NDFSAIAKFC ILYFPESNID LNLNALWNAN KELCASLCFA LQSPRFIGTA | 180 |
| IAFNKRAAIL QWFPNKLEEF DSLNQLPASI SHDVYMHCSY DFAQNKHDVK RALNQVIRKH | 240 |
| LLAQGWQDRE ITSLSECNGK PVMIVLLEHF NSFHSIYRTH STSMIEARKK FYLVGIGKEN | 300 |
| VDQAGREVFD EFFQLEYDTI FQQIEFVRKK CEEYGAAVFY MPSIGMDITT IFASNTRLAP | 360 |
| IQVVALGHPA TTHSDFIEYV IVEDDYVGSE DCFSEKLLRL PKDALPYVPS SLAPEKVDYL | 420 |
| FREEPEVVNI GIAATTMKLN PTFLATLRII RDKAKVKVHF HFALGQSFGI THPHVKWFIE | 480 |
| QYLGDSATAH AHAPYREYLD ILRHCDMMLN PFPFGNTNGI IDMVTLGLVG VCKTGQEVHE | 540 |
| HIDEGLFKRL GLPEWLIAQS VEEYINCAVR LAENHKERLE LRQHIIKTNG LKTLFKGDPS | 600 |
| PMGKVLFEKV KALKF | 615 |
Predicted 3D structure by AlphaFold2 with pLDDT = 96.12 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT41(323-589)
| MLQESQPSIN RLEKAIVDKN YEVACSELLK ILEKIDANFG DINEIEFDFP EQISDLLEKR | 60 |
| TQYFCTRIAN AVTNLFIDPN LMLSESGALR FIAFQRWLAL IFASSPYVNA DHILKTYNTN | 120 |
| SDILGDIHLN NDFSAIAKFC ILYFPESNID LNLNALWNAN KELCASLCFA LQSPRFIGTA | 180 |
| IAFNKRAAIL QWFPNKLEEF DSLNQLPASI SHDVYMHCSY DFAQNKHDVK RALNQVIRKH | 240 |
| LLAQGWQDRE ITSLSECNGK PVMIVLLEHF NSFHSIYRTH STSMIEARKK FYLVGIGKEN | 300 |
| VDQAGREVFD EFFQLEYDTI FQQIEFVRKK CEEYGAAVFY MPSIGMDITT IFASNTRLAP | 360 |
| IQVVALGHPA TTHSDFIEYV IVEDDYVGSE DCFSEKLLRL PKDALPYVPS SLAPEKVDYL | 420 |
| FREEPEVVNI GIAATTMKLN PTFLATLRII RDKAKVKVHF HFALGQSFGI THPHVKWFIE | 480 |
| QYLGDSATAH AHAPYREYLD ILRHCDMMLN PFPFGNTNGI IDMVTLGLVG VCKTGQEVHE | 540 |
| HIDEGLFKRL GLPEWLIAQS VEEYINCAVR LAENHKERLE LRQHIIKTNG LKTLFKGDPS | 600 |
| PMGKVLFEKV KALKF | 615 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.