CAZyme3D

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Entry ID

Information for CAZyme ID: CBL10431.1

Basic Information

GenBank IDCBL10431.1
FamilyCE2
Sequence Length349
UniProt IDD4KJA1(100,100)Download
Average pLDDT?97.30
CAZy50 ID33969
CAZy50 RepNo, BBF42855.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID657315
KingdomBacteria
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusRoseburia
SpeciesRoseburia intestinalis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MIIKPDNEML  SYSGRIDFDD  RLAPVLVYAC  SSIGMKFTGT  SLKAVIANHR  SCWTNELGYF60
IDGEQKRFTL  SPDEEKKTYT  LAEGLSEGTH  ELLLFKRMDS  CHTFTFYGFE  IDDGAKVLPL120
PEKPKRKMEF  FGDSVSCGEV  SEAVEYVGKP  DPEHDGEYSN  SWYSYAWMTA  RKLNAQIHDT180
SQGGISLLDD  TGWFAAPHYK  GVESCYDKIE  YHPDLGPTKQ  WDFSKYVPHV  VVVAIGQNDN240
HPVDYMAEDY  DSEKSKNWRK  HYQAFIEKLM  QLYPKAQIIL  ATTILCHDKS  WDRSIDEVCT300
RIGSERVHHF  LYTKNGSGTP  GHIRIPEAEQ  MSDELAAYIN  SLGDAVWES349

Predicted 3D structure by AlphaFold2 with pLDDT = 97.30 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CE2(127-339)

MIIKPDNEML  SYSGRIDFDD  RLAPVLVYAC  SSIGMKFTGT  SLKAVIANHR  SCWTNELGYF60
IDGEQKRFTL  SPDEEKKTYT  LAEGLSEGTH  ELLLFKRMDS  CHTFTFYGFE  IDDGAKVLPL120
PEKPKRKMEF  FGDSVSCGEV  SEAVEYVGKP  DPEHDGEYSN  SWYSYAWMTA  RKLNAQIHDT180
SQGGISLLDD  TGWFAAPHYK  GVESCYDKIE  YHPDLGPTKQ  WDFSKYVPHV  VVVAIGQNDN240
HPVDYMAEDY  DSEKSKNWRK  HYQAFIEKLM  QLYPKAQIIL  ATTILCHDKS  WDRSIDEVCT300
RIGSERVHHF  LYTKNGSGTP  GHIRIPEAEQ  MSDELAAYIN  SLGDAVWES349

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help