CAZyme3D

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Entry ID

Information for CAZyme ID: CBL09365.1

Basic Information

GenBank IDCBL09365.1
FamilyCE12
Sequence Length228
UniProt IDD4KR63(100,100)Download
Average pLDDT?96.80
CAZy50 ID173594
CAZy50 RepNo, QOV20143.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID657315
KingdomBacteria
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusRoseburia
SpeciesRoseburia intestinalis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTTIFWAGDS  TVQYNDILTF  PQTGIGQVMN  LFLKPEVRVE  NHAKNGRSTK  SFIDESRLTP60
IYDKITAGDF  LFIQFGHNDE  KKNDPQRYTD  PHSDYMVNLE  KFVNAARNKG  AWPVFITPLE120
RRCFIDEEHL  DIGEHTDYVA  AMKQTAENLN  VPLIDLYSMS  RAEMRKAGAE  KTKEWYMHLP180
AGVYPSHMDG  LTDNTHLKYM  GAVVYAGCIA  RGLKELGGIY  SDLLVAWE228

Predicted 3D structure by AlphaFold2 with pLDDT = 96.80 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CE12(3-213)

MTTIFWAGDS  TVQYNDILTF  PQTGIGQVMN  LFLKPEVRVE  NHAKNGRSTK  SFIDESRLTP60
IYDKITAGDF  LFIQFGHNDE  KKNDPQRYTD  PHSDYMVNLE  KFVNAARNKG  AWPVFITPLE120
RRCFIDEEHL  DIGEHTDYVA  AMKQTAENLN  VPLIDLYSMS  RAEMRKAGAE  KTKEWYMHLP180
AGVYPSHMDG  LTDNTHLKYM  GAVVYAGCIA  RGLKELGGIY  SDLLVAWE228

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help