Information for CAZyme ID: CBA17261.1
Basic Information
GenBank ID | CBA17261.1 |
Family | CBM35, GH98 |
Sequence Length | 787 |
UniProt ID | D2UFV0(100,100)![]() |
Average pLDDT? | 89.02 |
CAZy50 ID | 9437 |
CAZy50 Rep | No, AXY74108.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 380358 |
Kingdom | Bacteria |
Phylum | Pseudomonadota |
Class | Gammaproteobacteria |
Order | Xanthomonadales |
Family | Xanthomonadaceae |
Genus | Xanthomonas |
Species | Xanthomonas albilineans |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MKMPRELHKC ALPCALLSML LSACGGDEDA HSAANTSPQI ASATPTVWSA TTRTPTTATV | 60 |
PRQVVSQTDN STTLRRPLSP SQPMFLIHAD SWNAADAQKI IDLIPADLRP YTVLLISLSI | 120 |
YHKGATGNQC NWLQVEDGIE TARSWIKTAA ANGVWAMIQP SSGGFSHFPD YPPDTDLEST | 180 |
VYGEFFRDYP NFIGFNYAEQ FWGFDQPCSG SAIQRWEHWA NLLKLTNKYG GYLAVSFTGG | 240 |
FWGANINPLA MVKRDQILRN ALSNYAQNFI IEEKFTTDYG YHDIESVSLG MFLSGFAGHY | 300 |
GIRPDRSGWY DSKGDDSDNY PVQAGSPHLI EHLTFTGETM FDGPEQIRLD AVHNLPNATT | 360 |
ADGYTTRRWE FYPHYRNIQL DIYRKILDGT LRILSRQEVI DRSKVVIVND TASGDDRNLY | 420 |
SSPESLFTGL YLLDDDGTYL NQHSWYKKTG RYPAIPTVFQ LTDDTAKSFK VQIPKTTYAT | 480 |
RWPTINDKLN ELNALFPQEY TGTLYAGRQD NTWVTYNPFK TNQSASGTIP LKYNSCATLN | 540 |
LTYGPYTSGV IKEFPQTLSI YLTNFDSPNG ALKTDTIDIE GATTAPTFTF ADRGDHQASI | 600 |
VTSTTTTNGL TLNVAHNGPL DITVQCTGTA NAGQTSPQIV PLQPPDAPPA YTGVLQYEAE | 660 |
NFDFRNIRNL VVYGVSGPIR NYQALGYVDF GTNPAASIRT DVNVPSAGTY QLQTRYSTTG | 720 |
ASIGTVDLYI NGVKVGTPTF AQTTSASDWA TLQQPVTLNA GSNRVEFRAN AAAPAALYLD | 780 |
NIRLSSQ | 787 |
Predicted 3D structure by AlphaFold2 with pLDDT = 89.02 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH98(73-391)+CBM35(679-783)
MKMPRELHKC ALPCALLSML LSACGGDEDA HSAANTSPQI ASATPTVWSA TTRTPTTATV | 60 |
PRQVVSQTDN STTLRRPLSP SQPMFLIHAD SWNAADAQKI IDLIPADLRP YTVLLISLSI | 120 |
YHKGATGNQC NWLQVEDGIE TARSWIKTAA ANGVWAMIQP SSGGFSHFPD YPPDTDLEST | 180 |
VYGEFFRDYP NFIGFNYAEQ FWGFDQPCSG SAIQRWEHWA NLLKLTNKYG GYLAVSFTGG | 240 |
FWGANINPLA MVKRDQILRN ALSNYAQNFI IEEKFTTDYG YHDIESVSLG MFLSGFAGHY | 300 |
GIRPDRSGWY DSKGDDSDNY PVQAGSPHLI EHLTFTGETM FDGPEQIRLD AVHNLPNATT | 360 |
ADGYTTRRWE FYPHYRNIQL DIYRKILDGT LRILSRQEVI DRSKVVIVND TASGDDRNLY | 420 |
SSPESLFTGL YLLDDDGTYL NQHSWYKKTG RYPAIPTVFQ LTDDTAKSFK VQIPKTTYAT | 480 |
RWPTINDKLN ELNALFPQEY TGTLYAGRQD NTWVTYNPFK TNQSASGTIP LKYNSCATLN | 540 |
LTYGPYTSGV IKEFPQTLSI YLTNFDSPNG ALKTDTIDIE GATTAPTFTF ADRGDHQASI | 600 |
VTSTTTTNGL TLNVAHNGPL DITVQCTGTA NAGQTSPQIV PLQPPDAPPA YTGVLQYEAE | 660 |
NFDFRNIRNL VVYGVSGPIR NYQALGYVDF GTNPAASIRT DVNVPSAGTY QLQTRYSTTG | 720 |
ASIGTVDLYI NGVKVGTPTF AQTTSASDWA TLQQPVTLNA GSNRVEFRAN AAAPAALYLD | 780 |
NIRLSSQ | 787 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.