CAZyme3D

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Entry ID

Information for CAZyme ID: CAY82143.1

Basic Information

GenBank IDCAY82143.1
FamilyCBM43, GH72
Sequence Length559
UniProt IDC8ZFH7(100,100)Download
Average pLDDT?83.39
CAZy50 ID46786
CAZy50 RepNo, AWU75604.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID643680
KingdomEukaryota
PhylumAscomycota
ClassSaccharomycetes
OrderSaccharomycetales
FamilySaccharomycetaceae
GenusSaccharomyces
SpeciesSaccharomyces cerevisiae

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MLFKSLSKLA  TAAAFFAGVA  TADDVPAIEV  VGNKFFYSNN  GSQFYIRGVA  YQADTANETS60
GSTVNDPLAN  YESCSRDIPY  LKKLNTNVIR  VYAINTTLDH  SECMKALNDA  DIYVIADLAA120
PATSINRDDP  TWTVDLFNSY  KTVVDTFANY  TNVLGFFAGN  EVTNNYTNTD  ASAFVKAAIR180
DVRQYISDKN  YRKIPVGYSS  NDDEDTRVKM  ADYFACGDDD  VKADFYGINM  YEWCGKSDFK240
TSGYADRTAE  FKNLSIPVFF  SEYGCNEVTP  RLFTEVEALY  GSNMTDVWSG  GIVYMYFEET300
NKYGLVSIDG  NDVKTLDDFN  NYSSEINKIS  PTSANTKSYS  ATTSDVACPA  TGKYWSAATE360
LPPTPNGGLC  SCMNAANSCV  VSDDVDSDDY  ETLFNWICNE  VDCSGISANG  TAGKYGAYSF420
CTPKEQLSFV  MNLYYEKSGG  SKSDCSFSGS  ATLQTATTQA  SCSSALKEIG  SMGTNSASGS480
VDLGSGTESS  TASSNASGSS  SKSNSGSSGS  SSSSSSSSAS  SSSSSKKNAA  TNVKANLAQV540
VFTSIISLSI  AAGVGFALV559

Predicted 3D structure by AlphaFold2 with pLDDT = 83.39 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH72(23-329)+CBM43(378-462)

MLFKSLSKLA  TAAAFFAGVA  TADDVPAIEV  VGNKFFYSNN  GSQFYIRGVA  YQADTANETS60
GSTVNDPLAN  YESCSRDIPY  LKKLNTNVIR  VYAINTTLDH  SECMKALNDA  DIYVIADLAA120
PATSINRDDP  TWTVDLFNSY  KTVVDTFANY  TNVLGFFAGN  EVTNNYTNTD  ASAFVKAAIR180
DVRQYISDKN  YRKIPVGYSS  NDDEDTRVKM  ADYFACGDDD  VKADFYGINM  YEWCGKSDFK240
TSGYADRTAE  FKNLSIPVFF  SEYGCNEVTP  RLFTEVEALY  GSNMTDVWSG  GIVYMYFEET300
NKYGLVSIDG  NDVKTLDDFN  NYSSEINKIS  PTSANTKSYS  ATTSDVACPA  TGKYWSAATE360
LPPTPNGGLC  SCMNAANSCV  VSDDVDSDDY  ETLFNWICNE  VDCSGISANG  TAGKYGAYSF420
CTPKEQLSFV  MNLYYEKSGG  SKSDCSFSGS  ATLQTATTQA  SCSSALKEIG  SMGTNSASGS480
VDLGSGTESS  TASSNASGSS  SKSNSGSSGS  SSSSSSSSAS  SSSSSKKNAA  TNVKANLAQV540
VFTSIISLSI  AAGVGFALV559

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help