CAZyme3D

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Entry ID

Information for CAZyme ID: CAP99250.1

Basic Information

GenBank IDCAP99250.1
FamilyCBM42, GH54
Sequence Length506
UniProt IDB6HW29(100,100)Download
Average pLDDT?95.29
CAZy50 ID60591
CAZy50 RepNo, AEO63099.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID500485
KingdomEukaryota
PhylumAscomycota
ClassEurotiomycetes
OrderEurotiales
FamilyAspergillaceae
GenusPenicillium
SpeciesPenicillium rubens

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MFSRRSFERF  CVLVLGLAAT  GTLVEAGPCD  IYASGNTPCI  AAHSTTRALY  NAYTGALYQV60
KRGSDGTTTD  ISPLSAGGVA  NAAAQDKFCS  NTTCLITIIY  DQSGRGNHLK  QAPPGGFKGP120
ESNGYDNLAS  AIGAPVTLNG  KKAYGVFMSP  GTGYSNNAAS  GTATGDEAEG  MYAVLDGTHY180
NGACCFDYGN  AEISSTDTGN  GHMEAIYYGD  NTAWGSGAGS  GPWIMADLEN  GLFSGSSPAN240
NAGDPSISHR  FVNAIVKGGP  NKWAIRGGNA  ASGSLSTYYN  GARPSVSGYN  PMSKEGAIIL300
GIGGDNSNGA  QGTFYEGVMT  SGYPTDATEN  SVQANIVAAK  YATAPLTSGT  ALTVGSSISL360
RATTSGYTTR  YIAHTGATIN  TQVVSSSSTT  ALKKQASWTV  RAGLANNNCF  SFESVDTPGS420
FIRHADFALV  LAANDGTKLL  HEDATFCPQT  GLNGETSSVR  SWSYPTRYFR  HYENVLYIAS480
NGGVHTFDSA  TSFNSDASWV  ISNGFA506

Predicted 3D structure by AlphaFold2 with pLDDT = 95.29 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH54(28-343)+CBM42(361-500)

MFSRRSFERF  CVLVLGLAAT  GTLVEAGPCD  IYASGNTPCI  AAHSTTRALY  NAYTGALYQV60
KRGSDGTTTD  ISPLSAGGVA  NAAAQDKFCS  NTTCLITIIY  DQSGRGNHLK  QAPPGGFKGP120
ESNGYDNLAS  AIGAPVTLNG  KKAYGVFMSP  GTGYSNNAAS  GTATGDEAEG  MYAVLDGTHY180
NGACCFDYGN  AEISSTDTGN  GHMEAIYYGD  NTAWGSGAGS  GPWIMADLEN  GLFSGSSPAN240
NAGDPSISHR  FVNAIVKGGP  NKWAIRGGNA  ASGSLSTYYN  GARPSVSGYN  PMSKEGAIIL300
GIGGDNSNGA  QGTFYEGVMT  SGYPTDATEN  SVQANIVAAK  YATAPLTSGT  ALTVGSSISL360
RATTSGYTTR  YIAHTGATIN  TQVVSSSSTT  ALKKQASWTV  RAGLANNNCF  SFESVDTPGS420
FIRHADFALV  LAANDGTKLL  HEDATFCPQT  GLNGETSSVR  SWSYPTRYFR  HYENVLYIAS480
NGGVHTFDSA  TSFNSDASWV  ISNGFA506

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help