CAZyme3D

You are here: Home Cite us: 2025

Entry ID

Information for CAZyme ID: CAL72479.1

Basic Information

GenBank IDCAL72479.1
FamilyGH13_30
Sequence Length546
UniProt IDA0A0H3MFL4(100,100)Download
Average pLDDT?92.57
CAZy50 ID30167
CAZy50 RepNo, AAS04609.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID410289
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycobacterium
SpeciesMycobacterium tuberculosis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MDQHQRPDPM  GPGSPRASAR  RPEPDPMGEP  WWSRAVFYQV  YPRSFADSNG  DGVGDLDGLA60
SRLDHLQQLG  VDAIWINPVT  VSPMADHGYD  VADPRDIDPL  FGGMPAFERL  VAAAHRQGIK120
VTMDVVPNHT  SSAHPWFQAA  LADLPGSPAR  DRYFFRDGRG  PDGSLPPNNW  ESVFGGPAWT180
RVREPDGNPG  QWYLHLFDTE  QPDLNSDNPE  ILDDFEKTLR  FWLDRGVDGF  RIDVAHGMAK240
PPGLPDSPDL  GIEVLHHRDD  DPRFNHPNVH  AIHRDIRTVI  DEYPGAVTVG  EVWVHDNARW300
AEYLRPDELH  LGFNFRLART  EFDAAEIRDA  VANSLAAAAL  QNATPTWTLA  NHDVGREVSR360
YGGGEIGLRR  AKAMAVVMLA  LPGVVFLYNG  QELGLPDVDL  PDEVLQDPTW  ERSGRTERGR420
DGCRVPIPWS  GNIPPFGFST  CPDTWLPMPP  EWAALTAEKQ  RADAGSTLSF  FRLALRLRRE480
RNEFDGDVDW  LAAPDDALIF  RRHGGGLVCA  LNAAERPLAL  PAGEPILASA  PLTDATLPPN540
AAAWLV546

Predicted 3D structure by AlphaFold2 with pLDDT = 92.57 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH13_30(54-397)

MDQHQRPDPM  GPGSPRASAR  RPEPDPMGEP  WWSRAVFYQV  YPRSFADSNG  DGVGDLDGLA60
SRLDHLQQLG  VDAIWINPVT  VSPMADHGYD  VADPRDIDPL  FGGMPAFERL  VAAAHRQGIK120
VTMDVVPNHT  SSAHPWFQAA  LADLPGSPAR  DRYFFRDGRG  PDGSLPPNNW  ESVFGGPAWT180
RVREPDGNPG  QWYLHLFDTE  QPDLNSDNPE  ILDDFEKTLR  FWLDRGVDGF  RIDVAHGMAK240
PPGLPDSPDL  GIEVLHHRDD  DPRFNHPNVH  AIHRDIRTVI  DEYPGAVTVG  EVWVHDNARW300
AEYLRPDELH  LGFNFRLART  EFDAAEIRDA  VANSLAAAAL  QNATPTWTLA  NHDVGREVSR360
YGGGEIGLRR  AKAMAVVMLA  LPGVVFLYNG  QELGLPDVDL  PDEVLQDPTW  ERSGRTERGR420
DGCRVPIPWS  GNIPPFGFST  CPDTWLPMPP  EWAALTAEKQ  RADAGSTLSF  FRLALRLRRE480
RNEFDGDVDW  LAAPDDALIF  RRHGGGLVCA  LNAAERPLAL  PAGEPILASA  PLTDATLPPN540
AAAWLV546

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help