Information for CAZyme ID: CAL49312.1
Basic Information
GenBank ID | CAL49312.1 |
Family | GH47 |
Sequence Length | 481 |
UniProt ID | Q07G80(100,100)![]() |
Average pLDDT? | 94.53 |
CAZy50 ID | 6928 |
CAZy50 Rep | No, CAD7199021.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 8364 |
Kingdom | Eukaryota |
Phylum | Chordata |
Class | Amphibia |
Order | Anura |
Family | Pipidae |
Genus | Xenopus |
Species | Xenopus tropicalis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MWLVLAFCLL GQGRAAVTKE EKAQLRSQVL EMFDHAYGSY MQHAYPADEL MPLTCRGRIR | 60 |
GQEPSRGDVD DALGKFSLTL IDTLDTLVVL NKTNEFEDAV RKVITDVNLD NDIVVSVFET | 120 |
NIRVLGGLLG GHSLAIMLKE NSDRMQWYND ELLHMAKELG YKLLPAFNTT SGLPYPRINL | 180 |
KFGIRSPEAR TGTETDTCTA CAGTMILEFA ALSRFTGIAV FEEHARKALD FLWEKRQRSS | 240 |
NLVGVTINIH TGDWVRKDSG VGAGIDSYYE YLLKAYVLLG DDSYLERFNT HYDAIMRYIS | 300 |
QPLLLLDVHI HKPMLTARTW MDSLLAFFPG LQVLKGDIRP AIETHEMLYQ VIKKHNFLPE | 360 |
AFTTDFRVHW AQHPLRPEFA ESTYFLYKAT GDPYYLEVGR TLIDNLNKYA RVPCGFAAVK | 420 |
DVRTGSHEDR MDSFFLAEMF KYLYLLFSER EDLIFDIESY IFTTEAHLLP LSLSTASQTS | 480 |
T | 481 |
Predicted 3D structure by AlphaFold2 with pLDDT = 94.53 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH47(32-470)
MWLVLAFCLL GQGRAAVTKE EKAQLRSQVL EMFDHAYGSY MQHAYPADEL MPLTCRGRIR | 60 |
GQEPSRGDVD DALGKFSLTL IDTLDTLVVL NKTNEFEDAV RKVITDVNLD NDIVVSVFET | 120 |
NIRVLGGLLG GHSLAIMLKE NSDRMQWYND ELLHMAKELG YKLLPAFNTT SGLPYPRINL | 180 |
KFGIRSPEAR TGTETDTCTA CAGTMILEFA ALSRFTGIAV FEEHARKALD FLWEKRQRSS | 240 |
NLVGVTINIH TGDWVRKDSG VGAGIDSYYE YLLKAYVLLG DDSYLERFNT HYDAIMRYIS | 300 |
QPLLLLDVHI HKPMLTARTW MDSLLAFFPG LQVLKGDIRP AIETHEMLYQ VIKKHNFLPE | 360 |
AFTTDFRVHW AQHPLRPEFA ESTYFLYKAT GDPYYLEVGR TLIDNLNKYA RVPCGFAAVK | 420 |
DVRTGSHEDR MDSFFLAEMF KYLYLLFSER EDLIFDIESY IFTTEAHLLP LSLSTASQTS | 480 |
T | 481 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.