CAZyme3D

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Entry ID

Information for CAZyme ID: CAL21795.1

Basic Information

GenBank IDCAL21795.1
FamilyCBM34, GH13_21
Sequence Length609
UniProt IDA0A0H2W174(100,100)Download
Average pLDDT?95.26
CAZy50 ID45846
CAZy50 RepNo, AMO50316.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID214092
KingdomBacteria
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusYersinia
SpeciesYersinia pestis
PDB file does not exist: ../CAZyme3D/mapped_uniprot_cazy/A0A0H2W174.pdb

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MLSGWHLPVS  PFVRLADDAL  HITLWLQGDS  LPAQVFLRCE  PDNEEWLLTM  EGHESHDRWR60
YSVSLPLYEG  QPTRRYCFKL  LWDDRQQWFG  PLGFSVIPPA  QLAQFAVDVP  DSGPDWVADQ120
VFYQIFPDRF  ASSQADHGVQ  EGSYIHHAAG  CPVSRREWQQ  PLDDVHAAST  FYGGDLAGIS180
QKIPYFQQLG  VTALYLNPIF  TAPSVHKYDT  EDYYQVDPYL  GGERDFLQLR  AATREVGIKL240
VLDGVFNHTG  DSHRWFDRYQ  QGENGACHHE  DSPYRGWFTF  LPDGRALDWK  GNASLPKLNF300
ANEEVAERIY  RSDDSVVRYW  LRPPYSIDGW  RLDVVHMLGE  DGGAKGNLHH  LHGIYQAAKE360
ENPQAYILGE  HFGDARNWLH  AGVEDAAMNY  MGFALPVRSF  LAELDVACHP  IKLDAADCAY420
WMDEYRAGLP  HSQQLRLFNQ  LDSHDTARFL  TLLKGDKTRM  QMALIWLFSW  IGVPCLFYGD480
EIGLDGGNDP  FCRKPFPWDE  AQWDHDLLSL  CQRMAALRHK  SIALRRGGCQ  VIHASGDSLV540
FIRSYQTERV  MVAIQRSDDA  DIFLPASPLL  NVAEWQRLEG  GGDLAVSETG  VNMGLEGKSV600
TLWCGVGEC609

Predicted 3D structure by AlphaFold2 with pLDDT = 95.26 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM34(5-110)+GH13_21(174-487)

0

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help