Information for CAZyme ID: CAL19287.1
Basic Information
| GenBank ID | CAL19287.1 |
| Family | GH94 |
| Sequence Length | 1117 |
| UniProt ID | A0A380PLW1(100,100) |
| Average pLDDT? | 94.63 |
| CAZy50 ID | 9589 |
| CAZy50 Rep | No, AMO55071.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 214092 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Yersiniaceae |
| Genus | Yersinia |
| Species | Yersinia pestis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MITKSITNVV HSAQGGVLQF NFMQGNMLKN MLAGDIMLNL FDTPRLDMAI ANIFLRQLDD | 60 |
| SGIVRVTPLL FHNDQLVTYK NAQDEIIWQT TAPDFTAFVT LSFSHEQEET YYYSVRVENH | 120 |
| SAQALRYDLI YGQDLSLSDA GATKTNESYC SQYLDHKVFS LDKYGYTVSS RQNLPQSTGN | 180 |
| PLLQLGSFSP AVGFSTDGYQ FFAKQYKFSH LPTIVTEPSL ENRNYQYEMA YVALQLQPVT | 240 |
| LSAGDSADSV FYGFYLSHQP EANIAQAFDV ARIRANYRQP QREPATEQAS PTQQGYDQRP | 300 |
| LSGDKLTAEE IEQLFDGEKQ FVEQLDGELL SFFYQEANYV TLAEKERHLE RPTGHIISSG | 360 |
| NNIDFTNPIM NSTHYIYGVF NSHLTLGNTS FNKLLGVNRN MLNQFKSSGQ RILVQIGGEY | 420 |
| RILAMPSAYE VGANFSRWIY KLAEGMIQVR AFASQSEPVI QLDIAVSGHS QPLNVIVSHQ | 480 |
| LIMGNLEEEA TVQVERHGDL LQISRTGDDH GPRFSIATRG GFTGVERYVD SDSQGVQYLL | 540 |
| LQGQIAQQAS IAFGGVLNGV DSRGKWLDFE HERQAYHAQY RALLNDFSVS FSAAPQQAQK | 600 |
| LNHAMHWFTH NALTHYSSPH GLEQPAGAAW GTRDVSQGPI EFFMAMGRYQ QVEAILCQTY | 660 |
| RHQYLETGTW PQWFMFDEYA QVQQQESHGD IVVWPLKALA DYLLATDRVA LLDTRLSYTS | 720 |
| IKQNFAFTGE QETLLQHVQR QIDHIVAHLV PGTYLSSYGD GDWDDTLQPA NQSLRENMVS | 780 |
| GWTIPLTLQT LKTLTKALQA YPQFADFIAR IVTLTSNMEA DYHKYLIKDG VISGFIHFNQ | 840 |
| GEAEYLLHPT DTTTQIKYRL LPAKRSIISE SFDKEMAEQH MKIIMDNLMY PDGVRLMDRM | 900 |
| AEYKAGKQTY FKRAELSANL GREIGLQYCH AHIRFIEALC KMGMAQELYD NLFKTIPVGI | 960 |
| QESVPNAELR QANSYFSSSD AKFDDRYQAY NNFDQLKTGA VAAKAGWRIY SSGPGIYINQ | 1020 |
| IVSNVLGVRY QAGDLLLDPV ISRQFGDVTL NYQLYNLPVT LRIYPQQGEF TPKRVLLDGQ | 1080 |
| SLAFTLQDNP YRSGAALIHR QEIEGRLTAH SQLEIYL | 1117 |
Predicted 3D structure by AlphaFold2 with pLDDT = 94.63 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH94(68-1083)
| MITKSITNVV HSAQGGVLQF NFMQGNMLKN MLAGDIMLNL FDTPRLDMAI ANIFLRQLDD | 60 |
| SGIVRVTPLL FHNDQLVTYK NAQDEIIWQT TAPDFTAFVT LSFSHEQEET YYYSVRVENH | 120 |
| SAQALRYDLI YGQDLSLSDA GATKTNESYC SQYLDHKVFS LDKYGYTVSS RQNLPQSTGN | 180 |
| PLLQLGSFSP AVGFSTDGYQ FFAKQYKFSH LPTIVTEPSL ENRNYQYEMA YVALQLQPVT | 240 |
| LSAGDSADSV FYGFYLSHQP EANIAQAFDV ARIRANYRQP QREPATEQAS PTQQGYDQRP | 300 |
| LSGDKLTAEE IEQLFDGEKQ FVEQLDGELL SFFYQEANYV TLAEKERHLE RPTGHIISSG | 360 |
| NNIDFTNPIM NSTHYIYGVF NSHLTLGNTS FNKLLGVNRN MLNQFKSSGQ RILVQIGGEY | 420 |
| RILAMPSAYE VGANFSRWIY KLAEGMIQVR AFASQSEPVI QLDIAVSGHS QPLNVIVSHQ | 480 |
| LIMGNLEEEA TVQVERHGDL LQISRTGDDH GPRFSIATRG GFTGVERYVD SDSQGVQYLL | 540 |
| LQGQIAQQAS IAFGGVLNGV DSRGKWLDFE HERQAYHAQY RALLNDFSVS FSAAPQQAQK | 600 |
| LNHAMHWFTH NALTHYSSPH GLEQPAGAAW GTRDVSQGPI EFFMAMGRYQ QVEAILCQTY | 660 |
| RHQYLETGTW PQWFMFDEYA QVQQQESHGD IVVWPLKALA DYLLATDRVA LLDTRLSYTS | 720 |
| IKQNFAFTGE QETLLQHVQR QIDHIVAHLV PGTYLSSYGD GDWDDTLQPA NQSLRENMVS | 780 |
| GWTIPLTLQT LKTLTKALQA YPQFADFIAR IVTLTSNMEA DYHKYLIKDG VISGFIHFNQ | 840 |
| GEAEYLLHPT DTTTQIKYRL LPAKRSIISE SFDKEMAEQH MKIIMDNLMY PDGVRLMDRM | 900 |
| AEYKAGKQTY FKRAELSANL GREIGLQYCH AHIRFIEALC KMGMAQELYD NLFKTIPVGI | 960 |
| QESVPNAELR QANSYFSSSD AKFDDRYQAY NNFDQLKTGA VAAKAGWRIY SSGPGIYINQ | 1020 |
| IVSNVLGVRY QAGDLLLDPV ISRQFGDVTL NYQLYNLPVT LRIYPQQGEF TPKRVLLDGQ | 1080 |
| SLAFTLQDNP YRSGAALIHR QEIEGRLTAH SQLEIYL | 1117 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.