CAZyme3D

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Entry ID

Information for CAZyme ID: CAK42408.1

Basic Information

GenBank IDCAK42408.1
FamilyGT34
Sequence Length461
UniProt IDA2R5B3(100,100)Download
Average pLDDT?76.31
CAZy50 ID26137
CAZy50 RepNo, QKX55281.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID5061
KingdomEukaryota
PhylumAscomycota
ClassEurotiomycetes
OrderEurotiales
FamilyAspergillaceae
GenusAspergillus
SpeciesAspergillus niger

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSLSRSPSPH  PAGAGWSSPG  LTSPSGSTTP  HNGFLSPNPI  GASGISWAAA  KAKSDEVRGY60
PSFSTKNSGF  FSRSRRQLSA  TLPRFRLGSG  SPNGYVDKDE  FGRGRPLSPA  TGWRLGFGRS120
VLRRRRSRLL  VALIFLLLGY  MFFGASLLQK  YRRSPLGGGR  KFVIILESNI  EGGVMEWKGA180
REWAIERNSI  WNKKNYVERW  GYELETVNML  AKKRYSHEWR  ESWEKVDLIR  ETMRKHPDAE240
WFWWLDLSTW  IMEYSYSLQD  HIFDRLDEII  YRDINVYNPL  NISHPPDDAY  LDEVSRSPNG300
DGDPSSVHML  LSQDCGGFNL  GSFFIRRSLW  ADRLLDAWWD  PVMYEQKHME  WEHKEQDAME360
YLYATQPWVR  SHVGFLPQRY  INSYPQGACG  DENDPNVHYQ  EDERDFLVNM  AGCQYGRDCW420
GEMYQYREIS  KQLNLTWWER  MKDKLNGLYE  KLFPGEEQQV  E461

Predicted 3D structure by AlphaFold2 with pLDDT = 76.31 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT34(161-421)

MSLSRSPSPH  PAGAGWSSPG  LTSPSGSTTP  HNGFLSPNPI  GASGISWAAA  KAKSDEVRGY60
PSFSTKNSGF  FSRSRRQLSA  TLPRFRLGSG  SPNGYVDKDE  FGRGRPLSPA  TGWRLGFGRS120
VLRRRRSRLL  VALIFLLLGY  MFFGASLLQK  YRRSPLGGGR  KFVIILESNI  EGGVMEWKGA180
REWAIERNSI  WNKKNYVERW  GYELETVNML  AKKRYSHEWR  ESWEKVDLIR  ETMRKHPDAE240
WFWWLDLSTW  IMEYSYSLQD  HIFDRLDEII  YRDINVYNPL  NISHPPDDAY  LDEVSRSPNG300
DGDPSSVHML  LSQDCGGFNL  GSFFIRRSLW  ADRLLDAWWD  PVMYEQKHME  WEHKEQDAME360
YLYATQPWVR  SHVGFLPQRY  INSYPQGACG  DENDPNVHYQ  EDERDFLVNM  AGCQYGRDCW420
GEMYQYREIS  KQLNLTWWER  MKDKLNGLYE  KLFPGEEQQV  E461

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help