CAZyme3D

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Entry ID

Information for CAZyme ID: CAG58677.1

Basic Information

GenBank IDCAG58677.1
FamilyGH72
Sequence Length468
UniProt IDQ6FVI6(100,100)Download
Average pLDDT?85.92
CAZy50 ID67337
CAZy50 RepNo, AOA68285.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID5478
KingdomEukaryota
PhylumAscomycota
ClassSaccharomycetes
OrderSaccharomycetales
FamilySaccharomycetaceae
GenusNakaseomyces
SpeciesNakaseomyces glabratus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSTTMQVFIL  WVLFLGVGQC  YLNPITIQNK  HFVDSVTGEP  FFIKGVDYQP  GGAAGINGES60
DPLSDPKKCA  RDIVLFQELG  INTVRVYSIN  PDLDHNICMS  MLSMAGIYLI  LDVNSPLPNQ120
HLNRYEPWKT  YNPLYLEHVF  KVVSQFSGYN  NTLGFFAGNE  VINDEESATN  SPIYVKKLIG180
DIKEYIAITC  DRLIPVGYSA  ADDLNYRVSL  SQYLECSTNS  NKVYDSVDFY  GVNSYQWCGE240
QTIRTSGYDK  LIEAYRNYTK  PVMLSEFGCN  RVLPRQFGEV  EVLYSKEMYT  VFSGGLVYEY300
SQEPNNYGLV  KINHDGSVRM  LPDFVTLQEK  YKKIALPNRD  QLHKELEGQS  IGLKRNVLCL360
DKYENLEISG  KTENDIPAKA  IKTGIQVKRG  HILELLNSNT  LQVQFEIFDV  YGQRWQGPKI420
VTPITRKTSN  KKENEAKTNG  ANGTSESLLI  ESIFTMLLMV  IAVQCIIL468

Predicted 3D structure by AlphaFold2 with pLDDT = 85.92 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH72(22-334)

MSTTMQVFIL  WVLFLGVGQC  YLNPITIQNK  HFVDSVTGEP  FFIKGVDYQP  GGAAGINGES60
DPLSDPKKCA  RDIVLFQELG  INTVRVYSIN  PDLDHNICMS  MLSMAGIYLI  LDVNSPLPNQ120
HLNRYEPWKT  YNPLYLEHVF  KVVSQFSGYN  NTLGFFAGNE  VINDEESATN  SPIYVKKLIG180
DIKEYIAITC  DRLIPVGYSA  ADDLNYRVSL  SQYLECSTNS  NKVYDSVDFY  GVNSYQWCGE240
QTIRTSGYDK  LIEAYRNYTK  PVMLSEFGCN  RVLPRQFGEV  EVLYSKEMYT  VFSGGLVYEY300
SQEPNNYGLV  KINHDGSVRM  LPDFVTLQEK  YKKIALPNRD  QLHKELEGQS  IGLKRNVLCL360
DKYENLEISG  KTENDIPAKA  IKTGIQVKRG  HILELLNSNT  LQVQFEIFDV  YGQRWQGPKI420
VTPITRKTSN  KKENEAKTNG  ANGTSESLLI  ESIFTMLLMV  IAVQCIIL468

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help