CAZyme3D

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Entry ID

Information for CAZyme ID: CAG1845731.1

Basic Information

GenBank IDCAG1845731.1
FamilyCBM48, GH13_8
Sequence Length833
UniProt IDA0A804JEB0(100,100)Download
Average pLDDT?84.22
CAZy50 ID937
CAZy50 RepNo, CAG7908015.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID214687
KingdomEukaryota
PhylumStreptophyta
ClassMagnoliopsida
OrderZingiberales
FamilyMusaceae
GenusMusa
SpeciesMusa acuminata

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MAFTLAGIRL  PTVRTSRLSA  RSGFQAEQGR  RAADLAFLSR  KPIKVPFLGS  SSDADPAYTT60
VSATGKVLVP  GTESDDVPSS  TLPTSNTEAA  SSNLQSFEDK  VEPDAGQTST  ASELTGAEST120
SEGDKGTNSS  QAKERVEDVE  EKPRCVPSPG  SGRRIYEIDP  LLKGHRSHLD  YRYNQYKKMR180
EMIDQYEGSL  DAFSRGYEKF  GFKRSASGVT  YQEWAPGAKW  ATLIGDFNNW  NPNTNVMTQN240
EYGVWEVFLP  NHADGSPPIP  HGSRVKIRMD  TPSGIKDSIP  AWIKYSVQAP  GEIPYNGIYY300
DPPEEEKYVF  QHPQPKAPKS  LRIYESHVGM  SSPEPKINTY  ASFRDDVLPR  IKRLGYNAVQ360
IMAIQEHSYY  ASFGYHVTNF  FAPSSRFGTP  DELKSLIDRA  HELGLLVLMD  IVHSHASNNV420
LDGLNQFDGT  DSHYFHPGPR  GHHWMWDSRL  FNYGSWEVLR  FLLSNARWWL  EEYKFDGFRF480
DGVTSMMYIH  HGLAVGFTGN  YNEYFGYATD  VDAVVYLMLV  NEMIHGLYPE  AVTIGEDVSG540
MPTFCIPIRD  GGIGFDYRLH  MAIPDKWIEI  MKLNDEDWKM  GEIVSTLTNR  RWLEKCVAYA600
ESHDQALVGD  KTIAFWLMDK  DMYDFMALDR  PSTPRIDRGI  ALHKMIRLVT  MGLGGEGYLN660
FMGNEFGHPE  WIDFPRGVQH  LPNGKVIPGN  NNSYDKCRRM  FDLGDADYLR  YRGMQEFDQA720
MQHLEDKYGF  MTSDQYISRM  DEGDKMIVFE  RGDLVFVFNF  HWTNSYFDYR  VGCLKPGKYK780
VVLDSDDKLF  GGFNRIDHTA  EYFSTDGSYD  NRPRSFLVYA  PSRTVVVYAL  SVD833

Predicted 3D structure by AlphaFold2 with pLDDT = 84.22 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM48(199-276)+GH13_8(372-664)

MAFTLAGIRL  PTVRTSRLSA  RSGFQAEQGR  RAADLAFLSR  KPIKVPFLGS  SSDADPAYTT60
VSATGKVLVP  GTESDDVPSS  TLPTSNTEAA  SSNLQSFEDK  VEPDAGQTST  ASELTGAEST120
SEGDKGTNSS  QAKERVEDVE  EKPRCVPSPG  SGRRIYEIDP  LLKGHRSHLD  YRYNQYKKMR180
EMIDQYEGSL  DAFSRGYEKF  GFKRSASGVT  YQEWAPGAKW  ATLIGDFNNW  NPNTNVMTQN240
EYGVWEVFLP  NHADGSPPIP  HGSRVKIRMD  TPSGIKDSIP  AWIKYSVQAP  GEIPYNGIYY300
DPPEEEKYVF  QHPQPKAPKS  LRIYESHVGM  SSPEPKINTY  ASFRDDVLPR  IKRLGYNAVQ360
IMAIQEHSYY  ASFGYHVTNF  FAPSSRFGTP  DELKSLIDRA  HELGLLVLMD  IVHSHASNNV420
LDGLNQFDGT  DSHYFHPGPR  GHHWMWDSRL  FNYGSWEVLR  FLLSNARWWL  EEYKFDGFRF480
DGVTSMMYIH  HGLAVGFTGN  YNEYFGYATD  VDAVVYLMLV  NEMIHGLYPE  AVTIGEDVSG540
MPTFCIPIRD  GGIGFDYRLH  MAIPDKWIEI  MKLNDEDWKM  GEIVSTLTNR  RWLEKCVAYA600
ESHDQALVGD  KTIAFWLMDK  DMYDFMALDR  PSTPRIDRGI  ALHKMIRLVT  MGLGGEGYLN660
FMGNEFGHPE  WIDFPRGVQH  LPNGKVIPGN  NNSYDKCRRM  FDLGDADYLR  YRGMQEFDQA720
MQHLEDKYGF  MTSDQYISRM  DEGDKMIVFE  RGDLVFVFNF  HWTNSYFDYR  VGCLKPGKYK780
VVLDSDDKLF  GGFNRIDHTA  EYFSTDGSYD  NRPRSFLVYA  PSRTVVVYAL  SVD833

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help