CAZyme3D

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Entry ID

Information for CAZyme ID: CAE7180134.1

Basic Information

GenBank IDCAE7180134.1
FamilyGH72
Sequence Length441
UniProt IDA0A6S6WC02(100,100)Download
Average pLDDT?84.95
CAZy50 ID68365
CAZy50 RepNo, SMQ45165.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID97479
KingdomEukaryota
PhylumAscomycota
ClassDothideomycetes
OrderPleosporales
FamilyPleosporaceae
GenusPyrenophora
SpeciesPyrenophora teres

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MVQLLSLSLL  AGLSAVASAV  PTIEVKGSKL  FTSEGNQFYV  KGIAYQLIPD  DPLVDATQCG60
LDSALMKTLG  ANSIRVYHVD  PDADHTKCMK  TFADAGIYLW  VDLDTFDTQV  EQNTPRWETD120
QHDAFAKVMD  AFEQFDNVAG  FFIGNEAITT  ANGSVTAPYI  KAATRDMKAY  RDKKGYRKIP180
IGYSAADIAS  LRPMLQNYLA  CGDNADDRLD  FFSLNAYSWC  GQSSYEQSGY  NMLEKNSEDL240
HIPIFMSETG  CNTVRPRDFA  DQNALFGEMA  DVWSGSIVYE  WIEEMNDYGI  ISYGPKVDAA300
SPSAPPDGFP  RSGKPSPVEP  DFGNLSKVWA  TLNPTGVKAS  NYSPTQTPVP  CPAYTAGAWE360
VNPSSPLPTL  GQKHDFNETP  TSASFSATPT  SGTQDAKESG  SGTGAKTSAP  ASTGAAANGL420
AKELKSVGAV  FAGVMAVLAW  L441

Predicted 3D structure by AlphaFold2 with pLDDT = 84.95 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH72(17-294)

MVQLLSLSLL  AGLSAVASAV  PTIEVKGSKL  FTSEGNQFYV  KGIAYQLIPD  DPLVDATQCG60
LDSALMKTLG  ANSIRVYHVD  PDADHTKCMK  TFADAGIYLW  VDLDTFDTQV  EQNTPRWETD120
QHDAFAKVMD  AFEQFDNVAG  FFIGNEAITT  ANGSVTAPYI  KAATRDMKAY  RDKKGYRKIP180
IGYSAADIAS  LRPMLQNYLA  CGDNADDRLD  FFSLNAYSWC  GQSSYEQSGY  NMLEKNSEDL240
HIPIFMSETG  CNTVRPRDFA  DQNALFGEMA  DVWSGSIVYE  WIEEMNDYGI  ISYGPKVDAA300
SPSAPPDGFP  RSGKPSPVEP  DFGNLSKVWA  TLNPTGVKAS  NYSPTQTPVP  CPAYTAGAWE360
VNPSSPLPTL  GQKHDFNETP  TSASFSATPT  SGTQDAKESG  SGTGAKTSAP  ASTGAAANGL420
AKELKSVGAV  FAGVMAVLAW  L441

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help