Information for CAZyme ID: CAE6958139.1
Basic Information
| GenBank ID | CAE6958139.1 |
| Family | CBM5, GH18 |
| Sequence Length | 1054 |
| UniProt ID | A0A812HR48(100,100) |
| Average pLDDT? | 90.44 |
| CAZy50 ID | 11502 |
| CAZy50 Rep | No, UUM32877.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2751176 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio sp. B1ASS3 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MHLRSGKAVK SAFTLSTLTA SCLMAFNSYA AVDCAPLEVW DSSKVYNGGD QVQHEGNAYK | 60 |
| ARYWTQNNNP AQAGEWGEWE NLGACSGTGP VDPPVNEVPT VTLTSPSASA SITAGDVVNL | 120 |
| AADAADTDGS ISKVEFFVDG ALVGTSTAAP FTASWTATEG AHEFSTKAYD DKNAVSVASA | 180 |
| VTLTVNAGQP GNEAPTVDVA LSATSVELGA TVTVTANAAD ADGTVAKVEF FAAGSLVGTV | 240 |
| TTAPYAVDFT PAQAGSVSIY AKATDDAGAT TDSSLVSLTV NGGAITSNCR PDGLYQTAGV | 300 |
| DVPYCTIYDE EGRELMGADH PRRVIGYFTS WRSGDDPQAA YLVKDIPWDQ LTHINYAFVS | 360 |
| IGSDGKVNVG DVTDPTNPAT GKTWPGVEVD PALGFKGHFG ALATYKQKHD VKTLISIGGW | 420 |
| AETGGHFGAD GNRVADGGFY TMTTNADGSI NHAGIEKFAT SAVEMMRTYK FDGLDIDYEY | 480 |
| PTSMAGAGNP YDKDFMEPRR PYLWASYQEL MKVLREKLDA ASAQDGIHYM LTIAAPSSGY | 540 |
| LLRGMETFDV TKYLDYVNIM TYDLHGAWND HVGHNAALFD TGKDSELAQW NVYGTAAYGG | 600 |
| IGYLNTDWAY HYFRGSMPAG RINIGVPYYT RGWQGVTGGD NGLWGRAALP NQSECAPGTG | 660 |
| EGEKNNCGHG AIGIDNMWHD TDPKGNEMGA GSNPMWHAKN LEKGIWGSYA QAYGLDPVND | 720 |
| PSDKFVGSYT RHYDDVAVAP WLWNAEKSVF LSTEDKASVE VKADYVIDKE IGGIMFWELA | 780 |
| GDYNCYVLDA NGNRTTIDAT EQACAAGNGE YHMGNTMTKA IYDKFKSATP YGNKIATGAI | 840 |
| PTEAVDIAVS VGGFKVGDQN YPINPKITFT NNTGQAIPGG TEFQFDIPVS APDNAKDQSG | 900 |
| GGLSVIASGH TRANNIGGLD GVMHRVSFSL PAWKDLPAGG TYELDMVYYL PISGPANYTV | 960 |
| ISGGKEFAFK FEQPDLPIGD LNSGTGGGGG TEPGTCDTTG LVTYPDLPQT DWQGNPSHAN | 1020 |
| QGDKVIHNGV VYQANWWTAS EPGSDGSWST VCNV | 1054 |
Predicted 3D structure by AlphaFold2 with pLDDT = 90.44 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM5(39-76)+GH18(322-784)+CBM5(1011-1048)
| MHLRSGKAVK SAFTLSTLTA SCLMAFNSYA AVDCAPLEVW DSSKVYNGGD QVQHEGNAYK | 60 |
| ARYWTQNNNP AQAGEWGEWE NLGACSGTGP VDPPVNEVPT VTLTSPSASA SITAGDVVNL | 120 |
| AADAADTDGS ISKVEFFVDG ALVGTSTAAP FTASWTATEG AHEFSTKAYD DKNAVSVASA | 180 |
| VTLTVNAGQP GNEAPTVDVA LSATSVELGA TVTVTANAAD ADGTVAKVEF FAAGSLVGTV | 240 |
| TTAPYAVDFT PAQAGSVSIY AKATDDAGAT TDSSLVSLTV NGGAITSNCR PDGLYQTAGV | 300 |
| DVPYCTIYDE EGRELMGADH PRRVIGYFTS WRSGDDPQAA YLVKDIPWDQ LTHINYAFVS | 360 |
| IGSDGKVNVG DVTDPTNPAT GKTWPGVEVD PALGFKGHFG ALATYKQKHD VKTLISIGGW | 420 |
| AETGGHFGAD GNRVADGGFY TMTTNADGSI NHAGIEKFAT SAVEMMRTYK FDGLDIDYEY | 480 |
| PTSMAGAGNP YDKDFMEPRR PYLWASYQEL MKVLREKLDA ASAQDGIHYM LTIAAPSSGY | 540 |
| LLRGMETFDV TKYLDYVNIM TYDLHGAWND HVGHNAALFD TGKDSELAQW NVYGTAAYGG | 600 |
| IGYLNTDWAY HYFRGSMPAG RINIGVPYYT RGWQGVTGGD NGLWGRAALP NQSECAPGTG | 660 |
| EGEKNNCGHG AIGIDNMWHD TDPKGNEMGA GSNPMWHAKN LEKGIWGSYA QAYGLDPVND | 720 |
| PSDKFVGSYT RHYDDVAVAP WLWNAEKSVF LSTEDKASVE VKADYVIDKE IGGIMFWELA | 780 |
| GDYNCYVLDA NGNRTTIDAT EQACAAGNGE YHMGNTMTKA IYDKFKSATP YGNKIATGAI | 840 |
| PTEAVDIAVS VGGFKVGDQN YPINPKITFT NNTGQAIPGG TEFQFDIPVS APDNAKDQSG | 900 |
| GGLSVIASGH TRANNIGGLD GVMHRVSFSL PAWKDLPAGG TYELDMVYYL PISGPANYTV | 960 |
| ISGGKEFAFK FEQPDLPIGD LNSGTGGGGG TEPGTCDTTG LVTYPDLPQT DWQGNPSHAN | 1020 |
| QGDKVIHNGV VYQANWWTAS EPGSDGSWST VCNV | 1054 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.