CAZyme3D

You are here: Home Cite us: 2025

Entry ID

Information for CAZyme ID: CAE6900454.1

Basic Information

GenBank IDCAE6900454.1
FamilyGH36
Sequence Length700
UniProt IDA0A812FSD2(100,100)Download
Average pLDDT?96.08
CAZy50 ID35105
CAZy50 RepNo, BBG31251.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2751176
KingdomBacteria
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. B1ASS3

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MQKIVHLKSK  NHSMIIKVDR  VPEILHWGAK  IAQIDPDLML  STERPISQAR  LDVDVPLSLC60
PELGSGHFNA  PGIEGHRNGE  DWAPVFTTTS  IEHDDNSATF  TLQDDIAGLE  LLIELQLNFN120
SDVVQKRITV  TNTTVGEYCL  GKLSSTLTLP  NHVNELMTFH  GRWCHEFQTQ  RLSFEHGGFM180
QENRRGRTSH  ENFPGLFAGT  NGFSEQLGQV  WGFHLGWSGN  HQLRADVRSD  GRRFVQAGEL240
LLSGEKRLQS  GETYQSPWLY  ATYSNSGLNG  ISERFHEFVR  ANIIQFPNNK  PRPVHLNTWE300
GIYFDHKPEY  IMQMATEAAE  MGVERFIIDD  GWFIGRDGER  AALGDWYLDE  TKYPNGLEPV360
IEHVNNKGME  FGLWVEPEMV  SQDSNLYRKH  PDWVLSLQGY  HQPSGRWQYV  LDLQNQDCFN420
YLFERLNDLL  TRYNIGYLKW  DMNRELVQPG  HQGKPAVHGQ  TKALYRLLDE  LQAAHPAVEI480
ESCSSGGGRI  DFEILKRTHR  FWASDCNDAL  ERQAIQRGMS  YFFPPEVMGA  HIGPAECHST540
NRRHAINMRG  VTALSGHMGV  ELDPVKESAE  EKQAFAHYIQ  LHKQYRDLLH  SGRTFRIDPA600
DQNQNIYGVE  NGQEMLITVC  QLAMPNHALP  SPLRVSCADE  NARYEVKIVE  MPTTSFQLMK660
QRPQWLDKTL  TLSGDNLKEI  GVTLPILDPE  SALIVHLKKI  700

Predicted 3D structure by AlphaFold2 with pLDDT = 96.08 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH36(4-660)

MQKIVHLKSK  NHSMIIKVDR  VPEILHWGAK  IAQIDPDLML  STERPISQAR  LDVDVPLSLC60
PELGSGHFNA  PGIEGHRNGE  DWAPVFTTTS  IEHDDNSATF  TLQDDIAGLE  LLIELQLNFN120
SDVVQKRITV  TNTTVGEYCL  GKLSSTLTLP  NHVNELMTFH  GRWCHEFQTQ  RLSFEHGGFM180
QENRRGRTSH  ENFPGLFAGT  NGFSEQLGQV  WGFHLGWSGN  HQLRADVRSD  GRRFVQAGEL240
LLSGEKRLQS  GETYQSPWLY  ATYSNSGLNG  ISERFHEFVR  ANIIQFPNNK  PRPVHLNTWE300
GIYFDHKPEY  IMQMATEAAE  MGVERFIIDD  GWFIGRDGER  AALGDWYLDE  TKYPNGLEPV360
IEHVNNKGME  FGLWVEPEMV  SQDSNLYRKH  PDWVLSLQGY  HQPSGRWQYV  LDLQNQDCFN420
YLFERLNDLL  TRYNIGYLKW  DMNRELVQPG  HQGKPAVHGQ  TKALYRLLDE  LQAAHPAVEI480
ESCSSGGGRI  DFEILKRTHR  FWASDCNDAL  ERQAIQRGMS  YFFPPEVMGA  HIGPAECHST540
NRRHAINMRG  VTALSGHMGV  ELDPVKESAE  EKQAFAHYIQ  LHKQYRDLLH  SGRTFRIDPA600
DQNQNIYGVE  NGQEMLITVC  QLAMPNHALP  SPLRVSCADE  NARYEVKIVE  MPTTSFQLMK660
QRPQWLDKTL  TLSGDNLKEI  GVTLPILDPE  SALIVHLKKI  700

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help