Information for CAZyme ID: CAD7277204.1
Basic Information
| GenBank ID | CAD7277204.1 |
| Family | CBM13, GT27 |
| Sequence Length | 619 |
| UniProt ID | A0A7R9BNE9(100,100) |
| Average pLDDT? | 87.79 |
| CAZy50 ID | 5535 |
| CAZy50 Rep | No, CAG5111572.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 399045 |
| Kingdom | Eukaryota |
| Phylum | Arthropoda |
| Class | Ostracoda |
| Order | Podocopida |
| Family | Cyprididae |
| Genus | Notodromas |
| Species | Notodromas monacha |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MKLGFRSRFR MQSCKIIALT SLVWLVFDVF LLMYYMTDCS DGQGWGCSGR ESKSAPLLDS | 60 |
| HEPAFHPRDV HKPVKKKSTS ELEALYEKLK HTLDYPLEKL HRWTEPLPVP TDDSKPGEGG | 120 |
| KAVQIPPDLE AEAKRKFQEN QFNVLASDLI SLNRSLADVR LTSCASKKYS PLLPSTSVVI | 180 |
| VFHNEAWTTL LRTIWSVINR SPRALLKEII LVDDASEKDH LGSLLEEYVA NLPVPVQVLR | 240 |
| TGTRSGLIRA RLLGAKHVRG EVITFLDAHC ECADGWLEPL LDEVARDRKT VVCPIIDVIS | 300 |
| DNTFEYVTAS DMTWGGFNWK MNFRWYRVPN REMDRRGGDR SAPLRTPTMA GGLFSIDREY | 360 |
| FYEVGTYDEG MEVWGGENLE MSFRIWMCGG KLEIITCSHV GHVFRDKSPY TFPGGVSNTI | 420 |
| FKNSARVAEV WMDEWKEFFY EMNPAAKRVN IGDISARREL RDRLGCKSFR WYLENVYPES | 480 |
| QLPLDYFYLG DIRNALNNKC LDTMGRKGGE NLGLQYCHSM GGNQLFAYTK RNQIMSDDNC | 540 |
| LDASSVSSPV KLVRCHGLGG NQMWVYDDTT QAIRHVNSGR CLSAPDARDP TLPTLKQCDG | 600 |
| SPAQQWLMKF DFKWQANQK | 619 |
Predicted 3D structure by AlphaFold2 with pLDDT = 87.79 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT27(177-476)+CBM13(492-608)
| MKLGFRSRFR MQSCKIIALT SLVWLVFDVF LLMYYMTDCS DGQGWGCSGR ESKSAPLLDS | 60 |
| HEPAFHPRDV HKPVKKKSTS ELEALYEKLK HTLDYPLEKL HRWTEPLPVP TDDSKPGEGG | 120 |
| KAVQIPPDLE AEAKRKFQEN QFNVLASDLI SLNRSLADVR LTSCASKKYS PLLPSTSVVI | 180 |
| VFHNEAWTTL LRTIWSVINR SPRALLKEII LVDDASEKDH LGSLLEEYVA NLPVPVQVLR | 240 |
| TGTRSGLIRA RLLGAKHVRG EVITFLDAHC ECADGWLEPL LDEVARDRKT VVCPIIDVIS | 300 |
| DNTFEYVTAS DMTWGGFNWK MNFRWYRVPN REMDRRGGDR SAPLRTPTMA GGLFSIDREY | 360 |
| FYEVGTYDEG MEVWGGENLE MSFRIWMCGG KLEIITCSHV GHVFRDKSPY TFPGGVSNTI | 420 |
| FKNSARVAEV WMDEWKEFFY EMNPAAKRVN IGDISARREL RDRLGCKSFR WYLENVYPES | 480 |
| QLPLDYFYLG DIRNALNNKC LDTMGRKGGE NLGLQYCHSM GGNQLFAYTK RNQIMSDDNC | 540 |
| LDASSVSSPV KLVRCHGLGG NQMWVYDDTT QAIRHVNSGR CLSAPDARDP TLPTLKQCDG | 600 |
| SPAQQWLMKF DFKWQANQK | 619 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.