CAZyme3D

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Entry ID

Information for CAZyme ID: CAD5986636.1

Basic Information

GenBank IDCAD5986636.1
FamilyCBM2, GH18
Sequence Length624
UniProt IDA0A7R8RTL6(100,100)Download
Average pLDDT?88.84
CAZy50 ID28136
CAZy50 RepNo, DAA01336.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2772433
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces sp. KY75

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSTDTPPRRS  RFRWIPLRSS  RSKVIAGLTA  LAVPFAAMVG  LATPAAAATS  ATATYTKKSD60
WSSGFEGQWT  VKNTGTTALS  SWTIEWDYPA  GTRVNSAWDA  TVTNSGNSWT  AKNLGWNGSI120
APGASVSFGF  NGSGPGAPSG  CKLNGASCDG  STVPGDNPPS  APGTPTTSDV  TNTSVKLSWS180
AATDDKGVKN  YDVLRNGAKI  ATVTDTTYTN  TGLTAGTDYT  YAVQARDTID  QLGPVSGSVS240
VRTTGGGGGE  QPGGDKINLG  YFTNWGVYGR  NYHVKNLVTS  GSAAKITHIN  YAFGNVQNGK300
CTIGDSYADY  DKAYTADQSV  DGKADTWDQP  LRGNFNQLRK  LKAQYPHIKI  LWSFGGWTWS360
GGFPQAAQNP  AAFAQSCYDL  VEDPRWADVF  DGIDLDWEYP  NACGLTCDTS  GPAALKNLAS420
AVKTKFGAGN  LVTAAITADG  SAGGKIDAAD  YAGAAQSFDW  YNVMTYDFFG  AWAAKGPTAP480
HSPLTPYTGI  PQEGFTSADA  IAKLKAKGVP  AKKLLLGIGF  YGRGWTGVTQ  SAPGGTATGA540
APGTYEAGIE  DYKVLKNTCP  ATGTIAGTAY  AHCGTNWWSY  DTPATIGSKM  TWAKNQGLGG600
AFFWEFSGDT  TNGELVSAIN  SGLK624

Predicted 3D structure by AlphaFold2 with pLDDT = 88.84 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM2(52-148)+GH18(258-620)

MSTDTPPRRS  RFRWIPLRSS  RSKVIAGLTA  LAVPFAAMVG  LATPAAAATS  ATATYTKKSD60
WSSGFEGQWT  VKNTGTTALS  SWTIEWDYPA  GTRVNSAWDA  TVTNSGNSWT  AKNLGWNGSI120
APGASVSFGF  NGSGPGAPSG  CKLNGASCDG  STVPGDNPPS  APGTPTTSDV  TNTSVKLSWS180
AATDDKGVKN  YDVLRNGAKI  ATVTDTTYTN  TGLTAGTDYT  YAVQARDTID  QLGPVSGSVS240
VRTTGGGGGE  QPGGDKINLG  YFTNWGVYGR  NYHVKNLVTS  GSAAKITHIN  YAFGNVQNGK300
CTIGDSYADY  DKAYTADQSV  DGKADTWDQP  LRGNFNQLRK  LKAQYPHIKI  LWSFGGWTWS360
GGFPQAAQNP  AAFAQSCYDL  VEDPRWADVF  DGIDLDWEYP  NACGLTCDTS  GPAALKNLAS420
AVKTKFGAGN  LVTAAITADG  SAGGKIDAAD  YAGAAQSFDW  YNVMTYDFFG  AWAAKGPTAP480
HSPLTPYTGI  PQEGFTSADA  IAKLKAKGVP  AKKLLLGIGF  YGRGWTGVTQ  SAPGGTATGA540
APGTYEAGIE  DYKVLKNTCP  ATGTIAGTAY  AHCGTNWWSY  DTPATIGSKM  TWAKNQGLGG600
AFFWEFSGDT  TNGELVSAIN  SGLK624

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help