CAZyme3D

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Entry ID

Information for CAZyme ID: CAD1842910.1

Basic Information

GenBank IDCAD1842910.1
FamilyGH36
Sequence Length319
UniProt IDA0A6V7QIG6(100,100)Download
Average pLDDT?81.25
CAZy50 ID16761
CAZy50 RepNo, CAE6203979.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID296719
KingdomEukaryota
PhylumStreptophyta
ClassMagnoliopsida
OrderPoales
FamilyBromeliaceae
GenusAnanas
SpeciesAnanas comosus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MAPNLTKSSD  VADVLAGGFV  DGDLPPSDFA  VKGGDLTVRG  HPFLLDVPPN  ITLAAAADFG60
GAGAFVGFDV  DEPLSRHVAP  VGRLAGIRFM  SIFRFKVWWT  THWVGSTGAD  VEHETQLLVL120
DRSNTGRPYV  LLLPLIEGSF  RASLQRGERP  DFVDMCVESG  SAAVRSASFR  SALYLHAGDD180
PYALVKEAMQ  VVRAHLGTFK  LLDEKSPPGI  VDKFGWCTWD  AFYLKVIKLL  GNGGVGGSEG240
AGGGGCPPGL  LLIDDGWQTI  CHDDDDPASG  EEGMNRTSAG  EQMPCRLIKF  EENRKFRDYT300
GKKSEGNCES  RGLGRSWGT319

Predicted 3D structure by AlphaFold2 with pLDDT = 81.25 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) :

MAPNLTKSSD  VADVLAGGFV  DGDLPPSDFA  VKGGDLTVRG  HPFLLDVPPN  ITLAAAADFG60
GAGAFVGFDV  DEPLSRHVAP  VGRLAGIRFM  SIFRFKVWWT  THWVGSTGAD  VEHETQLLVL120
DRSNTGRPYV  LLLPLIEGSF  RASLQRGERP  DFVDMCVESG  SAAVRSASFR  SALYLHAGDD180
PYALVKEAMQ  VVRAHLGTFK  LLDEKSPPGI  VDKFGWCTWD  AFYLKVIKLL  GNGGVGGSEG240
AGGGGCPPGL  LLIDDGWQTI  CHDDDDPASG  EEGMNRTSAG  EQMPCRLIKF  EENRKFRDYT300
GKKSEGNCES  RGLGRSWGT319

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help