CAZyme3D

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Entry ID

Information for CAZyme ID: CAD1823880.1

Basic Information

GenBank IDCAD1823880.1
FamilyGT47
Sequence Length534
UniProt IDA0A6V7NZ69(100,100)Download
Average pLDDT?78.86
CAZy50 ID53163
CAZy50 RepNo, CAG1859473.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID296719
KingdomEukaryota
PhylumStreptophyta
ClassMagnoliopsida
OrderPoales
FamilyBromeliaceae
GenusAnanas
SpeciesAnanas comosus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MLFSTANPNR  PSPSPPPPMA  RRLRLRLRRG  RGRGGAASFS  GWRRRIAAAA  IVTAAITALI60
AFAVPSPLTI  GFFFFPAADS  SGGDRSPPPP  PPPLLHPLPR  RAASALASIL  ANSTSRSSAS120
APPRPRSGIR  AHRRRIRALV  IERRSHVAYW  RMSPDEALAY  AKKEIENAPL  VVDDPDLYAP180
LFRNVSAFKR  SYELMERILK  VYIYQDGQAP  IFHTPDLKGI  YASEGWFLKL  MEEDRRFTVK240
DPSKAHLFYL  PYSSRQLQLA  IYVPGSHNLR  PLSLFLRDYV  NAIAAKYPFW  NRTRGRDHFL300
VACHDWGPYT  TTAHEELLKN  TIKALCNADS  SEGIFIRGRD  VSLPETTIRT  PNRPQRYVGK360
RRVSQRPFLA  FFAGNVHGRV  RPILLKYWDG  KDDDMRIYGP  LPNRVSRQMS  YVEHMKSSKF420
CICPMGYEVN  SPRIVEAIYS  ECVPVIIADN  FVLPFDEVLN  WSAFSVVIAE  KDIPNLKNIL480
SGISLRRYLA  MHTCVSMLQK  HFLWHAKPLK  YDLFHMVLHS  IWFNRLKQIE  VQEQ534

Predicted 3D structure by AlphaFold2 with pLDDT = 78.86 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT47(197-483)

MLFSTANPNR  PSPSPPPPMA  RRLRLRLRRG  RGRGGAASFS  GWRRRIAAAA  IVTAAITALI60
AFAVPSPLTI  GFFFFPAADS  SGGDRSPPPP  PPPLLHPLPR  RAASALASIL  ANSTSRSSAS120
APPRPRSGIR  AHRRRIRALV  IERRSHVAYW  RMSPDEALAY  AKKEIENAPL  VVDDPDLYAP180
LFRNVSAFKR  SYELMERILK  VYIYQDGQAP  IFHTPDLKGI  YASEGWFLKL  MEEDRRFTVK240
DPSKAHLFYL  PYSSRQLQLA  IYVPGSHNLR  PLSLFLRDYV  NAIAAKYPFW  NRTRGRDHFL300
VACHDWGPYT  TTAHEELLKN  TIKALCNADS  SEGIFIRGRD  VSLPETTIRT  PNRPQRYVGK360
RRVSQRPFLA  FFAGNVHGRV  RPILLKYWDG  KDDDMRIYGP  LPNRVSRQMS  YVEHMKSSKF420
CICPMGYEVN  SPRIVEAIYS  ECVPVIIADN  FVLPFDEVLN  WSAFSVVIAE  KDIPNLKNIL480
SGISLRRYLA  MHTCVSMLQK  HFLWHAKPLK  YDLFHMVLHS  IWFNRLKQIE  VQEQ534

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help