CAZyme3D

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Entry ID

Information for CAZyme ID: CAD08100.1

Basic Information

GenBank IDCAD08100.1
FamilyGT35
Sequence Length797
UniProt IDQ8Z226(100,100)Download
Average pLDDT?97.62
CAZy50 ID18604
CAZy50 RepNo, AWB67567.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID220341
KingdomBacteria
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusSalmonella
SpeciesSalmonella enterica

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSQPTFNKDQ  FQAALTRQWQ  RFGLLSASDM  TPRQWWQAVS  GALAELLSAQ  PVAQPTKGQR60
HVNYISMEFL  IGRLTGNNLL  NLGWYQDVSD  VLKAHDINLT  DLLEEEVDPA  LGNGGLGRLA120
ACFLDSMATV  GQSATGYGLN  YQYGLFRQSF  VEGKQMEAPD  DWHRGSYPWF  RHNEALDVQV180
GIGGKVTKEG  RWKPGFVITG  QSWDLPVLGY  RNGVAQPLRL  WQATHAHPFD  LTKFNDGAFL240
RAEQQGIDAE  KLTKVLYPND  NHTAGKKLRL  MQQYFQCACS  VADILRRHHL  AGRKLHELAD300
YEVIQLNDTH  PTIAIPELLR  VLLDEHQMSW  DDAWAITSKT  FAYTNHTLMP  EALECWDERL360
IKALLPRHMQ  IIKQINDRFK  ALVDNTWPGD  KQVWAKLAVV  HDRQVRMANM  CVVSGFAVNG420
VAALHSDLVV  KDLFPEYHQL  WPNKFHNVTN  GITPRRWIKQ  CNPQLAALLD  KTLKKEWAND480
LDQLINLEKY  ADDATFRQQY  RDIKRANKER  LVKFIQARTG  IEISSHAIFD  IQIKRLHEYK540
RQHLNLLHIL  ALYKEIRENP  QADRVPRVFL  FGAKAAPGYY  LAKNIIFAIN  KVAEAINNDP600
AVGDKLKVVF  LPDYCVSAAE  MLIPAADISE  QISTAGKEAS  GTGNMKLALN  GALTVGTLDG660
ANVEIAEKVG  EENIFIFGHT  VEEVKALKAK  GYDPVKWRKK  DKVLDAVLKE  LESGQYSDGD720
KHAFDQMLHS  LGKQGGDPYL  VMADFAAYVE  AQKQVDALYR  DQEAWTRAAI  LNTARCGMFS780
SDRSIRDYQA  RIWQAKR797

Predicted 3D structure by AlphaFold2 with pLDDT = 97.62 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT35(92-795)

MSQPTFNKDQ  FQAALTRQWQ  RFGLLSASDM  TPRQWWQAVS  GALAELLSAQ  PVAQPTKGQR60
HVNYISMEFL  IGRLTGNNLL  NLGWYQDVSD  VLKAHDINLT  DLLEEEVDPA  LGNGGLGRLA120
ACFLDSMATV  GQSATGYGLN  YQYGLFRQSF  VEGKQMEAPD  DWHRGSYPWF  RHNEALDVQV180
GIGGKVTKEG  RWKPGFVITG  QSWDLPVLGY  RNGVAQPLRL  WQATHAHPFD  LTKFNDGAFL240
RAEQQGIDAE  KLTKVLYPND  NHTAGKKLRL  MQQYFQCACS  VADILRRHHL  AGRKLHELAD300
YEVIQLNDTH  PTIAIPELLR  VLLDEHQMSW  DDAWAITSKT  FAYTNHTLMP  EALECWDERL360
IKALLPRHMQ  IIKQINDRFK  ALVDNTWPGD  KQVWAKLAVV  HDRQVRMANM  CVVSGFAVNG420
VAALHSDLVV  KDLFPEYHQL  WPNKFHNVTN  GITPRRWIKQ  CNPQLAALLD  KTLKKEWAND480
LDQLINLEKY  ADDATFRQQY  RDIKRANKER  LVKFIQARTG  IEISSHAIFD  IQIKRLHEYK540
RQHLNLLHIL  ALYKEIRENP  QADRVPRVFL  FGAKAAPGYY  LAKNIIFAIN  KVAEAINNDP600
AVGDKLKVVF  LPDYCVSAAE  MLIPAADISE  QISTAGKEAS  GTGNMKLALN  GALTVGTLDG660
ANVEIAEKVG  EENIFIFGHT  VEEVKALKAK  GYDPVKWRKK  DKVLDAVLKE  LESGQYSDGD720
KHAFDQMLHS  LGKQGGDPYL  VMADFAAYVE  AQKQVDALYR  DQEAWTRAAI  LNTARCGMFS780
SDRSIRDYQA  RIWQAKR797

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help