CAZyme3D

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Entry ID

Information for CAZyme ID: CAB91480.2

Basic Information

GenBank IDCAB91480.2
FamilyCBM48, GH13_8
Sequence Length741
UniProt IDQ9P5P3(100,100)Download
Average pLDDT?89.58
CAZy50 ID937
CAZy50 RepNo, CAG7908015.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID5141
KingdomEukaryota
PhylumAscomycota
ClassSordariomycetes
OrderSordariales
FamilySordariaceae
GenusNeurospora
SpeciesNeurospora crassa

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MNDISDNSSN  SLANGGTVAN  SDIPKDGTGV  LSIDPWLEPF  KDTLKSRYSK  AQSWIDTINK60
TEGGLEKFSR  GTEIFGFNVD  KDNTITYREW  APNAKQASLI  GEFNNWDRNA  HRMKKNEFGV120
FEITIPPTAN  GQPAIPHNSK  IKITLELPDG  QWVDRLPAWI  KYVTQDLSVS  PAYEARFWNP180
PQSERYTFKH  KRPSKPESLR  IYEAHVGISS  PECKVATYKE  FTKTMLPRIK  NLGYNAIQLM240
AIMEHAYYAS  FGYQVNSFFA  ASSRYGPPED  LKELVDTAHA  MGIAVLLDVV  HSHASKNVLD300
GLNEFDGTDH  QYFHGGGRGK  HDLWDSRLFN  YGHHEVMRFL  LSNLRFWMDE  YAFDGFRFDG360
VTSMLYLHHG  IGTGFSGGYH  EYFGPDVDEE  AVVYLMLANE  MLHQLYPNVI  TVAEDVSGMP420
ALCLPLSLGG  VGFDYRLAMA  IPDMWIKILK  EKKDEEWDMA  NITWTLTNRR  HGEKTIAYCE480
SHDQALVGDK  TLMMHLCDAE  LYTNMSILTP  LTPVIDRGMA  LHKMIRLLTH  SLGGEGYLNF540
EGNEFGHPEW  LDFPREGNQN  SFWYARRQLN  LTEDGLLRYQ  YLNNFDRSMN  LTEDKYGWLH600
APQAYISLKH  EGDKVIVFER  AGLVFVFNFH  PSNSYTDYRI  GIEQAGTYRI  VLDSDTKEHG660
GFNRLDPQTR  FFTSDLPWNN  RKNSTHVYIP  ARTAFRPGEG  HKRRKASLCK  SSAFVVIVAL720
ICVLLKPAAA  KVLVEMVGDD  V741

Predicted 3D structure by AlphaFold2 with pLDDT = 89.58 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM48(75-128)+GH13_8(250-543)

MNDISDNSSN  SLANGGTVAN  SDIPKDGTGV  LSIDPWLEPF  KDTLKSRYSK  AQSWIDTINK60
TEGGLEKFSR  GTEIFGFNVD  KDNTITYREW  APNAKQASLI  GEFNNWDRNA  HRMKKNEFGV120
FEITIPPTAN  GQPAIPHNSK  IKITLELPDG  QWVDRLPAWI  KYVTQDLSVS  PAYEARFWNP180
PQSERYTFKH  KRPSKPESLR  IYEAHVGISS  PECKVATYKE  FTKTMLPRIK  NLGYNAIQLM240
AIMEHAYYAS  FGYQVNSFFA  ASSRYGPPED  LKELVDTAHA  MGIAVLLDVV  HSHASKNVLD300
GLNEFDGTDH  QYFHGGGRGK  HDLWDSRLFN  YGHHEVMRFL  LSNLRFWMDE  YAFDGFRFDG360
VTSMLYLHHG  IGTGFSGGYH  EYFGPDVDEE  AVVYLMLANE  MLHQLYPNVI  TVAEDVSGMP420
ALCLPLSLGG  VGFDYRLAMA  IPDMWIKILK  EKKDEEWDMA  NITWTLTNRR  HGEKTIAYCE480
SHDQALVGDK  TLMMHLCDAE  LYTNMSILTP  LTPVIDRGMA  LHKMIRLLTH  SLGGEGYLNF540
EGNEFGHPEW  LDFPREGNQN  SFWYARRQLN  LTEDGLLRYQ  YLNNFDRSMN  LTEDKYGWLH600
APQAYISLKH  EGDKVIVFER  AGLVFVFNFH  PSNSYTDYRI  GIEQAGTYRI  VLDSDTKEHG660
GFNRLDPQTR  FFTSDLPWNN  RKNSTHVYIP  ARTAFRPGEG  HKRRKASLCK  SSAFVVIVAL720
ICVLLKPAAA  KVLVEMVGDD  V741

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help