Information for CAZyme ID: CAB61811.1
Basic Information
GenBank ID | CAB61811.1 |
Family | GH50 |
Sequence Length | 798 |
UniProt ID | Q9RKF0(100,100)![]() |
Average pLDDT? | 90.51 |
CAZy50 ID | 27513 |
CAZy50 Rep | No, QHY94217.1 |
Structure Cluster | - |
EC Number(s) | 3.2.1.81 |
Substrates(s) | agarose |
Taxonomy
Tax ID | 100226 |
Kingdom | Bacteria |
Phylum | Actinomycetota |
Class | Actinomycetes |
Order | Kitasatosporales |
Family | Streptomycetaceae |
Genus | Streptomyces |
Species | Streptomyces coelicolor |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MTVHKRACTT PPPRASRSFR VRWPVLIAAA CAGLVLATTS PPAVAAGAHD LGDETMLYDF | 60 |
QDGLVPAEVG PYQAKTTIVG RGDKKLRVDF QARKNYYSSF SVRPEPVWNW SAEESESLGI | 120 |
AMELTNPSDR SVQLTIDLES STGVATRSVN VPAGGGGTYY FDVDSPALHR DTGLRADPSW | 180 |
LADKDVTSAV WMWGSKETDT SRISQLNFYV AGLLHDRSVI VDDIRVVRDA PADPDYLKGL | 240 |
VDAFGQNNKV DYKGKVSRTS EILRQRAAEA KDLRRHPVPE DRSRYGGWLN GPRLEATGNF | 300 |
RVEKYQGRWT LVDPDGYLFF STGIDNARMF DSPTTTGYDF DHDAIQELPP PSLTAGGPED | 360 |
LNRVQKSALP TRTKMSETRA DLFSKLPKYR TRAGEGFGYA PDTLAGPVAQ GETYSFYKAN | 420 |
VARKYPGSNY MERWRDNTVD RMLSWGFTSF GNWTDPEMYD NDRIPYFAHG WIKGDFKTVS | 480 |
TGQDYWGPMP DPFDPAFSDA AARTARAVAD EVADSPLAIG VFMDNELSWG NAGSFSTRYG | 540 |
VVIDTMSRDA AESPTKSAFS DELEEKYGTI DALNAAWQTT VPSWEALRSG SADLGSDETA | 600 |
KESDYSALMT LYATQYFKTV DAELDKVMPD HLYAGSRFAS WGRTPEVVEA ASKYVDIMSY | 660 |
NEYREGLHPS EWAFLEELDK PSLIGEFHMG TTTTGQPHPG LVSAGTQAER ARMYAEYMEQ | 720 |
LIDNPYMVGG HWFQYADSPV TGRALDGENY NIGFVSVTDR PYPEIVAAAR DVNQRLYDRR | 780 |
YGNLATAEGH YTGRRSAE | 798 |
Predicted 3D structure by AlphaFold2 with pLDDT = 90.51 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH50(105-777)
MTVHKRACTT PPPRASRSFR VRWPVLIAAA CAGLVLATTS PPAVAAGAHD LGDETMLYDF | 60 |
QDGLVPAEVG PYQAKTTIVG RGDKKLRVDF QARKNYYSSF SVRPEPVWNW SAEESESLGI | 120 |
AMELTNPSDR SVQLTIDLES STGVATRSVN VPAGGGGTYY FDVDSPALHR DTGLRADPSW | 180 |
LADKDVTSAV WMWGSKETDT SRISQLNFYV AGLLHDRSVI VDDIRVVRDA PADPDYLKGL | 240 |
VDAFGQNNKV DYKGKVSRTS EILRQRAAEA KDLRRHPVPE DRSRYGGWLN GPRLEATGNF | 300 |
RVEKYQGRWT LVDPDGYLFF STGIDNARMF DSPTTTGYDF DHDAIQELPP PSLTAGGPED | 360 |
LNRVQKSALP TRTKMSETRA DLFSKLPKYR TRAGEGFGYA PDTLAGPVAQ GETYSFYKAN | 420 |
VARKYPGSNY MERWRDNTVD RMLSWGFTSF GNWTDPEMYD NDRIPYFAHG WIKGDFKTVS | 480 |
TGQDYWGPMP DPFDPAFSDA AARTARAVAD EVADSPLAIG VFMDNELSWG NAGSFSTRYG | 540 |
VVIDTMSRDA AESPTKSAFS DELEEKYGTI DALNAAWQTT VPSWEALRSG SADLGSDETA | 600 |
KESDYSALMT LYATQYFKTV DAELDKVMPD HLYAGSRFAS WGRTPEVVEA ASKYVDIMSY | 660 |
NEYREGLHPS EWAFLEELDK PSLIGEFHMG TTTTGQPHPG LVSAGTQAER ARMYAEYMEQ | 720 |
LIDNPYMVGG HWFQYADSPV TGRALDGENY NIGFVSVTDR PYPEIVAAAR DVNQRLYDRR | 780 |
YGNLATAEGH YTGRRSAE | 798 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.