CAZyme3D

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Entry ID

Information for CAZyme ID: CAB16926.1

Basic Information

GenBank IDCAB16926.1
FamilyGH94
Sequence Length813
UniProt IDO87964(100,100)Download
Average pLDDT?97.55
CAZy50 ID23467
CAZy50 RepNo, AFN74946.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2337
KingdomBacteria
PhylumThermotogota
ClassThermotogae
OrderThermotogales
FamilyThermotogaceae
GenusThermotoga
SpeciesThermotoga neapolitana

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKFGYFDDKN  REYVIVTPRT  PYPWINYLGT  EDFFSIISHM  AGGYCFYKDA  RLRRITRFRY60
NNVPTDAGGR  YFYIREEDGD  FWSPTWMPVR  RDLSFFEARH  GLGYTKIAGD  INGLRATITF120
FVPRHFTGEV  HHLVLQNRTE  RPRRIKLFSF  IEFCLWNALD  DMTNFQRNYS  TGEVEIEGSV180
IYHKTEYRER  RNHYAFYSVN  HSIDGFDTDR  ESFMGLYNGF  EAPQAVVEGN  PRNSVASGWA240
PIASHYLELE  IPPLGEKELI  FILGYVENPE  EEKWERPGVI  NKKRAKEMIE  RFKTGEDVER300
ALKELKEYWD  ELLGRIQVET  HDEKLNRMVN  IWNQYQCMVT  FNIARTSSYF  ESGISRGIGF360
RDSNQDILGF  VHMIPEKARQ  RILDLASIQF  EDGSTYHQFQ  PLTKKGNNEI  GGGFNDDPLW420
LILSTSAYIK  ETGDWSILNE  EVPFDNDPDK  KATLFEHLKR  SFYFTVNNLG  PHGLPLIGRA480
DWNDCLNLNC  FSKNPDESFQ  TTVNALDGRV  AESVFIAGLF  VLAGKEFVEI  CRRLGLEDEA540
KEAEKHVKKM  IETTLEYGWD  GEWFLRAYDA  FGRKVGSKEC  EEGKIFIEPQ  GMCVMAGIGV600
ENGYAKKALD  SVKEHLDTHY  GLVLQQPAYS  RYYIELGEIS  SYPPGYKENA  GIFCHNNPWV660
AIAESVIGRG  DRAFEIYRKI  TPAYLEDISE  IHRTEPYVYA  QMVAGKDAPR  HGEAKNSWLT720
GTAAWSFVAI  TQYILGVRPT  YDGLMVDPCI  PEDWDGFKIT  RRFRGATYEI  TVKNPHHVSK780
GVKEIIVDGK  KIEGQVLPVF  NDGKVHRVEV  LMG813

Predicted 3D structure by AlphaFold2 with pLDDT = 97.55 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH94(2-810)

MKFGYFDDKN  REYVIVTPRT  PYPWINYLGT  EDFFSIISHM  AGGYCFYKDA  RLRRITRFRY60
NNVPTDAGGR  YFYIREEDGD  FWSPTWMPVR  RDLSFFEARH  GLGYTKIAGD  INGLRATITF120
FVPRHFTGEV  HHLVLQNRTE  RPRRIKLFSF  IEFCLWNALD  DMTNFQRNYS  TGEVEIEGSV180
IYHKTEYRER  RNHYAFYSVN  HSIDGFDTDR  ESFMGLYNGF  EAPQAVVEGN  PRNSVASGWA240
PIASHYLELE  IPPLGEKELI  FILGYVENPE  EEKWERPGVI  NKKRAKEMIE  RFKTGEDVER300
ALKELKEYWD  ELLGRIQVET  HDEKLNRMVN  IWNQYQCMVT  FNIARTSSYF  ESGISRGIGF360
RDSNQDILGF  VHMIPEKARQ  RILDLASIQF  EDGSTYHQFQ  PLTKKGNNEI  GGGFNDDPLW420
LILSTSAYIK  ETGDWSILNE  EVPFDNDPDK  KATLFEHLKR  SFYFTVNNLG  PHGLPLIGRA480
DWNDCLNLNC  FSKNPDESFQ  TTVNALDGRV  AESVFIAGLF  VLAGKEFVEI  CRRLGLEDEA540
KEAEKHVKKM  IETTLEYGWD  GEWFLRAYDA  FGRKVGSKEC  EEGKIFIEPQ  GMCVMAGIGV600
ENGYAKKALD  SVKEHLDTHY  GLVLQQPAYS  RYYIELGEIS  SYPPGYKENA  GIFCHNNPWV660
AIAESVIGRG  DRAFEIYRKI  TPAYLEDISE  IHRTEPYVYA  QMVAGKDAPR  HGEAKNSWLT720
GTAAWSFVAI  TQYILGVRPT  YDGLMVDPCI  PEDWDGFKIT  RRFRGATYEI  TVKNPHHVSK780
GVKEIIVDGK  KIEGQVLPVF  NDGKVHRVEV  LMG813

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help