Information for CAZyme ID: CAA7388449.1
Basic Information
GenBank ID | CAA7388449.1 |
Family | CBM20, GH77 |
Sequence Length | 970 |
UniProt ID | A0A7I8JYN4(100,100)![]() |
Average pLDDT? | 86.75 |
CAZy50 ID | 14213 |
CAZy50 Rep | No, BBN08499.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 51605 |
Kingdom | Eukaryota |
Phylum | Streptophyta |
Class | Magnoliopsida |
Order | Alismatales |
Family | Araceae |
Genus | Spirodela |
Species | Spirodela intermedia |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MVTSELPPFR STLKTVTLVF KIPYYTQWGQ SLLISGSEPL FGSWDVKRGL LLSPVHKPDD | 60 |
LLWWGKITVA SGFRSEYSYY VVNDDRNVLR WEAGRRREVI LPEGTQEGVV EIYDLWQAAT | 120 |
ETLFFRSAFK NVIFAEEWCL ESEEASEYDC QNPQKEGSIV IQFKISCPRI DEGTLVYVTG | 180 |
NASELGHWNA QNGLRLFYVG GSVWQGECMM RKDDFPIKYP FCYSQNRKSG DSLLEIGQNR | 240 |
ELKLDLTAGN PPNFVYLSDG SFREIPWRGA GVAVPMFSVR SEDDLGVGEF LDLKLLVDWA | 300 |
VDSGFHLVQL LPVNDTSVHG TWWDSYPYSS LSVFALHPLY LRLEALSQNI PEEVKQEIFI | 360 |
KKEELNGQSV DYEATMATKL FIAKKIFSLE KETILSSSSF LKFFSENKEW LKPYAAFCFL | 420 |
RDFFETSDHS QWGRFSNYSE EKLEKILSKD SLQYDIISFH YYIQFHLHLQ LSEAAEYAKK | 480 |
RKVVLKGDLP IGVDRNSVDT WVYPTLFRMN TSTGAPPDFF DKNGQNWGFP TYNWEEMSKD | 540 |
NYAWWRARLT QMAKYFTAYR IDHILGFFRI WELPEHAITG LVGKFRPSIA LSQDELEREG | 600 |
IWDFDRLSRP YIRQETLQDK FGTFWPGIIA HFLDENPNHC FQFKDQCNTE KKIVAKVETG | 660 |
TGKSLWLDRK DKILRGLIDL LQNIVLIRDP EDGSKFYPRF NMEDTSSFRD LDEHCKNVMR | 720 |
RLYHDYYFCR QDELWRQNAL KTLPALLNSS DMLACGEDLG FIPSCVYPVM QELGLIGLRI | 780 |
QRMAAEPGVE FGLPSNYNYM TVCAPSCHDC STMRAWWEED EERRFRFYRT VVGSNQAPPS | 840 |
RCIPELAQFI LRQHFESPSM WAIFPIQDLL ALKEEYTTRP ATEETINDPT NPKHYWRFRV | 900 |
HVSLETLLGD EELKGTIKDL VKESGRSYPV RDQVKDHEAG GRTVHSDAEC KKQIQNGLVK | 960 |
IPLQVNVQSE | 970 |
Predicted 3D structure by AlphaFold2 with pLDDT = 86.75 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM20(16-106)+CBM20(161-244)+GH77(274-922)
MVTSELPPFR STLKTVTLVF KIPYYTQWGQ SLLISGSEPL FGSWDVKRGL LLSPVHKPDD | 60 |
LLWWGKITVA SGFRSEYSYY VVNDDRNVLR WEAGRRREVI LPEGTQEGVV EIYDLWQAAT | 120 |
ETLFFRSAFK NVIFAEEWCL ESEEASEYDC QNPQKEGSIV IQFKISCPRI DEGTLVYVTG | 180 |
NASELGHWNA QNGLRLFYVG GSVWQGECMM RKDDFPIKYP FCYSQNRKSG DSLLEIGQNR | 240 |
ELKLDLTAGN PPNFVYLSDG SFREIPWRGA GVAVPMFSVR SEDDLGVGEF LDLKLLVDWA | 300 |
VDSGFHLVQL LPVNDTSVHG TWWDSYPYSS LSVFALHPLY LRLEALSQNI PEEVKQEIFI | 360 |
KKEELNGQSV DYEATMATKL FIAKKIFSLE KETILSSSSF LKFFSENKEW LKPYAAFCFL | 420 |
RDFFETSDHS QWGRFSNYSE EKLEKILSKD SLQYDIISFH YYIQFHLHLQ LSEAAEYAKK | 480 |
RKVVLKGDLP IGVDRNSVDT WVYPTLFRMN TSTGAPPDFF DKNGQNWGFP TYNWEEMSKD | 540 |
NYAWWRARLT QMAKYFTAYR IDHILGFFRI WELPEHAITG LVGKFRPSIA LSQDELEREG | 600 |
IWDFDRLSRP YIRQETLQDK FGTFWPGIIA HFLDENPNHC FQFKDQCNTE KKIVAKVETG | 660 |
TGKSLWLDRK DKILRGLIDL LQNIVLIRDP EDGSKFYPRF NMEDTSSFRD LDEHCKNVMR | 720 |
RLYHDYYFCR QDELWRQNAL KTLPALLNSS DMLACGEDLG FIPSCVYPVM QELGLIGLRI | 780 |
QRMAAEPGVE FGLPSNYNYM TVCAPSCHDC STMRAWWEED EERRFRFYRT VVGSNQAPPS | 840 |
RCIPELAQFI LRQHFESPSM WAIFPIQDLL ALKEEYTTRP ATEETINDPT NPKHYWRFRV | 900 |
HVSLETLLGD EELKGTIKDL VKESGRSYPV RDQVKDHEAG GRTVHSDAEC KKQIQNGLVK | 960 |
IPLQVNVQSE | 970 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.