Information for CAZyme ID: CAA2616476.1
Basic Information
| GenBank ID | CAA2616476.1 |
| Family | GT106 |
| Sequence Length | 513 |
| UniProt ID | A0A7I8IFJ4(100,100) |
| Average pLDDT? | 76.48 |
| CAZy50 ID | 39640 |
| CAZy50 Rep | No, CAB4104366.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 51605 |
| Kingdom | Eukaryota |
| Phylum | Streptophyta |
| Class | Magnoliopsida |
| Order | Alismatales |
| Family | Araceae |
| Genus | Spirodela |
| Species | Spirodela intermedia |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MRSCGVEDLK KIFSADFLLI TSAKQLQRTV ISPLFLFGST LFVLGLVSLL TGHIVSHREW | 60 |
| YAQLRRPWGF KQGHIRLESI DIWKSKFSDA YYGCSERSPH FKGAVSERKS NGYLLIAASG | 120 |
| GLNQQRIGVT DAVVVARILN ATLVLPDLDH HSFWKDESDF VDIFDADWFI SSLSNDVKIV | 180 |
| KRIPDKVMRR MERPPYTMRI PRKSAPEYYL EFVLPILLRR RAVQLTKFDY RLAYDIDDEL | 240 |
| QKLRCRVNYH ALRFTKPIQD LGEKVVKRMQ EMASRFVAVH LRFEPDMLAF SGCYYGGGDK | 300 |
| ERKELGEIRK RWENLPDLDA EGERRRGKCP LTPHEVGLML RALGFGNDTY LYVASGEIYG | 360 |
| GVNTLKPLRD LFRNFYTKEM LAEKELKPFL PHSDVFVTNN NGNMAKILAG HRRYAGHKRT | 420 |
| IRPNAKKLSS LFKTRSQMHW ETFVSRPDEM RPGRGDFHEF PYACVCPDQS PTWPPPISSP | 480 |
| HIKPSTTSGA AEGGGVLLSV TAGCEEDGPA VGG | 513 |
Predicted 3D structure by AlphaFold2 with pLDDT = 76.48 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT106(113-414)
| MRSCGVEDLK KIFSADFLLI TSAKQLQRTV ISPLFLFGST LFVLGLVSLL TGHIVSHREW | 60 |
| YAQLRRPWGF KQGHIRLESI DIWKSKFSDA YYGCSERSPH FKGAVSERKS NGYLLIAASG | 120 |
| GLNQQRIGVT DAVVVARILN ATLVLPDLDH HSFWKDESDF VDIFDADWFI SSLSNDVKIV | 180 |
| KRIPDKVMRR MERPPYTMRI PRKSAPEYYL EFVLPILLRR RAVQLTKFDY RLAYDIDDEL | 240 |
| QKLRCRVNYH ALRFTKPIQD LGEKVVKRMQ EMASRFVAVH LRFEPDMLAF SGCYYGGGDK | 300 |
| ERKELGEIRK RWENLPDLDA EGERRRGKCP LTPHEVGLML RALGFGNDTY LYVASGEIYG | 360 |
| GVNTLKPLRD LFRNFYTKEM LAEKELKPFL PHSDVFVTNN NGNMAKILAG HRRYAGHKRT | 420 |
| IRPNAKKLSS LFKTRSQMHW ETFVSRPDEM RPGRGDFHEF PYACVCPDQS PTWPPPISSP | 480 |
| HIKPSTTSGA AEGGGVLLSV TAGCEEDGPA VGG | 513 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.