CAZyme3D

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Entry ID

Information for CAZyme ID: BCL44455.1

Basic Information

GenBank IDBCL44455.1
FamilyCE4, GH153
Sequence Length644
UniProt IDA0A7U3LYC5(100,100)Download
Average pLDDT?93.09
CAZy50 ID5976
CAZy50 RepNo, ATM73176.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1812935
KingdomBacteria
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEnterobacter
SpeciesEnterobacter roggenkampii

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MNTRFSASLI  LIGWLCLSAS  VCAQALSFIA  SSARPQLEAS  KPWPQNQFLV  LAYHDVEDDA60
ADQRYLSVRT  SALNEQISWL  LHNGYHVISV  QDILDAHDGK  KTLPPKAVLL  SFDDGYSSFY120
TRVWPLLQAW  NVPALWAPVG  SWVDTPENQK  VNFGGLMTPR  DRFATWDMVR  ELSRSPLIEI180
GSHTWASHYG  IPANPQGSRE  PAIANRFNDK  ATGRYETDRQ  FNQRIGDDVR  KVTEKITQVT240
GKAPRAWVWP  YGAANGTSLA  IARQQGYELA  FTLEDGLGNV  QELGNIPRLL  IAGNPSLKAF300
ASTVSQVQEH  EPVRVMHVDL  DYVYDPNPAQ  QTQNINRLIQ  RVYDMKISHV  FLQAFADPQG360
DGRIRALYFP  NRQLPVRADL  FNFVSWQLQT  RAGVKVFAWM  PVLSFDLDPA  LPRVQRRDRS420
SGQLCEATDP  YIRLSPWDPQ  VRQQVTDIYE  DLARYASFNG  ILFHDDAVLT  DVDDGPQSTT480
RQKSQTLIGF  THALSLAVKH  IRGPQIKTAR  NMFALPILQP  ESEAWFAQNL  DDFLAEYDWT540
VPMAMPLMES  VPADESDAWL  TRLVNAVAAR  PGALDKTIFE  LQARDWDRKP  QRAVSDSQLA600
QWMRVLQLNG  VKNYGYYPDN  FINNQPDISR  IRPVFSSYWY  PDND644

Predicted 3D structure by AlphaFold2 with pLDDT = 93.09 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CE4(100-270)+GH153(313-475)+GH153(477-636)

MNTRFSASLI  LIGWLCLSAS  VCAQALSFIA  SSARPQLEAS  KPWPQNQFLV  LAYHDVEDDA60
ADQRYLSVRT  SALNEQISWL  LHNGYHVISV  QDILDAHDGK  KTLPPKAVLL  SFDDGYSSFY120
TRVWPLLQAW  NVPALWAPVG  SWVDTPENQK  VNFGGLMTPR  DRFATWDMVR  ELSRSPLIEI180
GSHTWASHYG  IPANPQGSRE  PAIANRFNDK  ATGRYETDRQ  FNQRIGDDVR  KVTEKITQVT240
GKAPRAWVWP  YGAANGTSLA  IARQQGYELA  FTLEDGLGNV  QELGNIPRLL  IAGNPSLKAF300
ASTVSQVQEH  EPVRVMHVDL  DYVYDPNPAQ  QTQNINRLIQ  RVYDMKISHV  FLQAFADPQG360
DGRIRALYFP  NRQLPVRADL  FNFVSWQLQT  RAGVKVFAWM  PVLSFDLDPA  LPRVQRRDRS420
SGQLCEATDP  YIRLSPWDPQ  VRQQVTDIYE  DLARYASFNG  ILFHDDAVLT  DVDDGPQSTT480
RQKSQTLIGF  THALSLAVKH  IRGPQIKTAR  NMFALPILQP  ESEAWFAQNL  DDFLAEYDWT540
VPMAMPLMES  VPADESDAWL  TRLVNAVAAR  PGALDKTIFE  LQARDWDRKP  QRAVSDSQLA600
QWMRVLQLNG  VKNYGYYPDN  FINNQPDISR  IRPVFSSYWY  PDND644

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help