CAZyme3D

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Entry ID

Information for CAZyme ID: BCL28033.1

Basic Information

GenBank IDBCL28033.1
FamilyCBM16, GH18
Sequence Length565
UniProt IDA0A7G1NX69(100,100)Download
Average pLDDT?89.39
CAZy50 ID49259
CAZy50 RepNo, CCA57960.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID47760
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces aurantiacus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MPRLPRRRRT  WAGALAAVLA  ASVLSLAGAG  QASAADVNNT  KNAGYESGLS  NWTCSAGSGA60
TVTSPVHSGA  SALKATPAGQ  DNARCSQTVA  VKANSSYTLS  AWVQGGYAYL  GASGTGTTDV120
STWTPDSSSW  KQLTTSFTTG  ANTTSVTVYT  HGWYGQPAYF  ADDVSVFGPD  GGGGVDPDPV180
VPSTPAGLNV  ASTTSSAVSL  AWNTVSGASG  YNIYRGGTKV  LAVTGTSATV  TGLAASTSYS240
FQVTATNAAG  ESAKSTAVTG  TTRASSDGGT  ALPKHAVTGY  WQNFNNGAAV  QKISDVQSQY300
DIIAVSFADA  TTTPGAVTFN  LDSAGLGGYT  VDQFKADVQA  KKAAGKKVII  SIGGERGTVA360
VNDSASATNF  ANSVYSLMQT  YGFDGVDIDL  ENGLNATYMT  QALRSLSAKA  GSSLVITMAP420
QTIDMQSTSN  GYFQTALNIK  DILTVVNMQY  YNSGSMLGCD  GKVYSQGSVD  FLTALACIQL480
EGGLAPSQVG  LGVPASTRGA  GSGYVSPAIV  NNALDCLAKG  TNCGSFKPSR  TYPDLRGAMT540
WSTNWDATAG  NAWSNAVGPH  VHGLP565

Predicted 3D structure by AlphaFold2 with pLDDT = 89.39 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM16(38-151)+GH18(275-551)

MPRLPRRRRT  WAGALAAVLA  ASVLSLAGAG  QASAADVNNT  KNAGYESGLS  NWTCSAGSGA60
TVTSPVHSGA  SALKATPAGQ  DNARCSQTVA  VKANSSYTLS  AWVQGGYAYL  GASGTGTTDV120
STWTPDSSSW  KQLTTSFTTG  ANTTSVTVYT  HGWYGQPAYF  ADDVSVFGPD  GGGGVDPDPV180
VPSTPAGLNV  ASTTSSAVSL  AWNTVSGASG  YNIYRGGTKV  LAVTGTSATV  TGLAASTSYS240
FQVTATNAAG  ESAKSTAVTG  TTRASSDGGT  ALPKHAVTGY  WQNFNNGAAV  QKISDVQSQY300
DIIAVSFADA  TTTPGAVTFN  LDSAGLGGYT  VDQFKADVQA  KKAAGKKVII  SIGGERGTVA360
VNDSASATNF  ANSVYSLMQT  YGFDGVDIDL  ENGLNATYMT  QALRSLSAKA  GSSLVITMAP420
QTIDMQSTSN  GYFQTALNIK  DILTVVNMQY  YNSGSMLGCD  GKVYSQGSVD  FLTALACIQL480
EGGLAPSQVG  LGVPASTRGA  GSGYVSPAIV  NNALDCLAKG  TNCGSFKPSR  TYPDLRGAMT540
WSTNWDATAG  NAWSNAVGPH  VHGLP565

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help