CAZyme3D

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Entry ID

Information for CAZyme ID: BCJ98970.1

Basic Information

GenBank IDBCJ98970.1
FamilyCBM35, GH43_2
Sequence Length594
UniProt IDA0A7I8DKT2(100,100)Download
Average pLDDT?91.62
CAZy50 ID51560
CAZy50 RepNo, QJD85967.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1727145
KingdomBacteria
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAnaerocolumna
SpeciesAnaerocolumna chitinilytica

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MLKLLSGSIK  VLTRSQKLFL  IALFTIMLLA  APSAVCFAQN  PVITSIYTAD  PSAHVWADGK60
IYIYASHDID  PNQGCDLMDK  YHVYSSSDMV  NWTDEGEILN  ASQVPWGRAE  GGFMWAPDCA120
YKNGTYYFYF  PHPSGTDWGN  TWKIGVATSN  KPASDFTVQG  YIPGLESLID  PCVFQDDDGQ180
TYLYYGGGGV  CKGGKLKDNM  MEIDGSMQTM  TGLTDFHEAT  WVFKRNGLYY  LTYADNHSDS240
TGDNRLQYAT  STNPLGPWTS  RGVYMDPTDS  YCAHGSVVEY  KGQWYQFYFD  SSVSHNDWLR300
TTCVDKLNFN  ADGTIQKVIA  TTTGVPSVGP  SPTPNPNLIK  YEAENAVLGN  GATVGTDSLA360
SGGKCIQNLH  LTNSYCQFNN  INGGTGGRAT  IDIYYATNDT  GAKIGLTLNG  VDYSFLNTIS420
TGGWNNYTGH  TYLTVPLNPG  TANTIKLTGG  NGGVNIDYIT  ISSFNEKGVS  TAKYEAESGS480
LANGVVIAND  SAASGGKCLQ  NMHLTNASCR  INNIDGGSGG  SRTLKISYAS  NEASTITVIV540
NGTPAGTLSC  TATGGWSTFT  GSIQKSITLN  SGTNNNIQFV  GGNGGINLDY  ITIQ594

Predicted 3D structure by AlphaFold2 with pLDDT = 91.62 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH43_2(48-314)+CBM35(341-461)+CBM35(474-593)

MLKLLSGSIK  VLTRSQKLFL  IALFTIMLLA  APSAVCFAQN  PVITSIYTAD  PSAHVWADGK60
IYIYASHDID  PNQGCDLMDK  YHVYSSSDMV  NWTDEGEILN  ASQVPWGRAE  GGFMWAPDCA120
YKNGTYYFYF  PHPSGTDWGN  TWKIGVATSN  KPASDFTVQG  YIPGLESLID  PCVFQDDDGQ180
TYLYYGGGGV  CKGGKLKDNM  MEIDGSMQTM  TGLTDFHEAT  WVFKRNGLYY  LTYADNHSDS240
TGDNRLQYAT  STNPLGPWTS  RGVYMDPTDS  YCAHGSVVEY  KGQWYQFYFD  SSVSHNDWLR300
TTCVDKLNFN  ADGTIQKVIA  TTTGVPSVGP  SPTPNPNLIK  YEAENAVLGN  GATVGTDSLA360
SGGKCIQNLH  LTNSYCQFNN  INGGTGGRAT  IDIYYATNDT  GAKIGLTLNG  VDYSFLNTIS420
TGGWNNYTGH  TYLTVPLNPG  TANTIKLTGG  NGGVNIDYIT  ISSFNEKGVS  TAKYEAESGS480
LANGVVIAND  SAASGGKCLQ  NMHLTNASCR  INNIDGGSGG  SRTLKISYAS  NEASTITVIV540
NGTPAGTLSC  TATGGWSTFT  GSIQKSITLN  SGTNNNIQFV  GGNGGINLDY  ITIQ594

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help