CAZyme3D

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Entry ID

Information for CAZyme ID: BCJ63036.1

Basic Information

GenBank IDBCJ63036.1
FamilyCBM2, CBM46, GH5_4
Sequence Length696
UniProt IDA0A810MNZ0(100,100)Download
Average pLDDT?91.40
CAZy50 ID36076
CAZy50 RepNo, UZN03284.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID338584
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusPolymorphospora
SpeciesPolymorphospora rubra
PDB file does not exist: ../CAZyme3D/mapped_uniprot_cazy/A0A810MNZ0.pdb

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTALRSTTRR  TRWRIGLLAS  GLSVLLAALG  MTFAVSAQAA  AGCRVVYTAP  NQWPGGFTAN60
VAVTNLGDTI  NNWSLTWTFP  SGQQVTQAWN  ANVTSSGANV  TATNVGYNGT  IATNATVSFG120
FNGSWTGANT  APSSFALNGV  TCTGSVGPTT  PPTTQPPTSP  PPTGNPTNPA  AAVAAMEPGW180
NLGNSFDATG  DGETSWGNPR  VTAQLLDNIK  AQGFKSVRIP  VTWGQHHGAA  PNYTINPTYL240
NRVKEVVDWA  LADDFYVMIN  IHHDSWQWIA  NMPANRTTVL  ARYNAIWTQV  ANTFRNSSPK300
LVFESVNEPQ  FTGSSGDAQN  AALLHELNTS  FHGIVRQSGG  NNATRLLVLP  TLHTSSDQAR360
IDELVATFDA  LDDPNLIATY  HFYGYWPFSV  NVAGGTRFDA  TVQQDLTDAF  DRIHTAFTAR420
GIPVILGEYG  LLGFDRHTGT  IQQGEKLKFF  EFLGHYARAR  QITTMWWDNG  QHFNRNTHQW480
NDPELFAQIK  SSWTTRSGTA  SSDQVFTARS  GAVTAKSLTL  NLNGTSFVGL  RHGNTDLVRG540
TDYTVSGNQL  TLTAAALTRL  SGDRAYGTNA  VLSARFSQGV  PWRINLVTYD  RPVLQNATGT600
TGSFTIPTTF  RGDQLATMEA  TYADGSNAGP  HNWTPFKEFD  HTFAPNYTAN  NIVLKPEFFA660
EVNDNSRVTL  RFHFWSGEIV  TYYVTRSGGN  VTGTTS696

Predicted 3D structure by AlphaFold2 with pLDDT = 91.40 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM2(43-142)+GH5_4(193-471)+CBM46(500-585)+CBM46(647-684)

0

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help