CAZyme3D

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Entry ID

Information for CAZyme ID: BCB79700.1

Basic Information

GenBank IDBCB79700.1
FamilyGH67
Sequence Length640
UniProt IDA0A6F8Y0W2(100,100)Download
Average pLDDT?96.68
CAZy50 ID33138
CAZy50 RepNo, WFE97792.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1076124
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusPhytohabitans
SpeciesPhytohabitans flavus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSIDKLAAAH  SAWLPPRALQ  AIKARRVAVH  GAGRLVETVR  EEVGTTVTED  AELILRLSSE60
RLGDEGFALY  RRDGVTVVLA  DAPAGLLYGF  FHVVRLGEAA  FAGEWPVERH  VPAMRRRMLD120
HWDNIDVHPV  MGQVERGYSG  GSIFWRDGVP  RDLDRVRVYA  RLLAATGINA  VAINNVNVHA180
TEARLLTDRL  GEVVAVAEVF  RPYGIRVHLS  VSFAAPVMLG  GLPTADPLDE  GVRGWWAQTT240
QRVYAAIPDF  GGYVVKADSE  GQPGPFGYGR  SHADGANVLA  DALAPFGGVV  HWRAFVYNHR300
QDWRDRSTDR  ARAAYDHFAP  LDGKFRDNAI  LQVKHGPIDF  QTREPVSPVI  AAMPATSVAV360
ELQVTQEYTG  QQRHAVYLGP  MWSEILGFRL  TSEADVAGLA  RELVAVSNVG  DDPFWTGHPL420
AQANLYAFGR  LAWDPTLDPL  SILDEWVDLA  LGPDVDRAAL  HAILDDSWRT  YESYTAPLGV480
GFMVRPGHHY  GPDVDGYEYT  PWGTYHFADR  EGVGVDRTRA  TGTGFTGQYP  QPWSDVYESL540
ERCPDELLLF  FHHVPYEHVL  HSGSTVIQHI  YDTHFAGAER  AVEMRRLWER  LAGQVDPELD600
ARVRERLDEQ  VRSAAEWRDQ  INTYFHRKSG  EPDAKGRQIY  640

Predicted 3D structure by AlphaFold2 with pLDDT = 96.68 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH67(43-637)

MSIDKLAAAH  SAWLPPRALQ  AIKARRVAVH  GAGRLVETVR  EEVGTTVTED  AELILRLSSE60
RLGDEGFALY  RRDGVTVVLA  DAPAGLLYGF  FHVVRLGEAA  FAGEWPVERH  VPAMRRRMLD120
HWDNIDVHPV  MGQVERGYSG  GSIFWRDGVP  RDLDRVRVYA  RLLAATGINA  VAINNVNVHA180
TEARLLTDRL  GEVVAVAEVF  RPYGIRVHLS  VSFAAPVMLG  GLPTADPLDE  GVRGWWAQTT240
QRVYAAIPDF  GGYVVKADSE  GQPGPFGYGR  SHADGANVLA  DALAPFGGVV  HWRAFVYNHR300
QDWRDRSTDR  ARAAYDHFAP  LDGKFRDNAI  LQVKHGPIDF  QTREPVSPVI  AAMPATSVAV360
ELQVTQEYTG  QQRHAVYLGP  MWSEILGFRL  TSEADVAGLA  RELVAVSNVG  DDPFWTGHPL420
AQANLYAFGR  LAWDPTLDPL  SILDEWVDLA  LGPDVDRAAL  HAILDDSWRT  YESYTAPLGV480
GFMVRPGHHY  GPDVDGYEYT  PWGTYHFADR  EGVGVDRTRA  TGTGFTGQYP  QPWSDVYESL540
ERCPDELLLF  FHHVPYEHVL  HSGSTVIQHI  YDTHFAGAER  AVEMRRLWER  LAGQVDPELD600
ARVRERLDEQ  VRSAAEWRDQ  INTYFHRKSG  EPDAKGRQIY  640

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help