CAZyme3D

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Entry ID

Information for CAZyme ID: BBW97819.1

Basic Information

GenBank IDBBW97819.1
FamilyGT108
Sequence Length323
UniProt IDA0A679FRW5(100,100)Download
Average pLDDT?94.99
CAZy50 ID138756
CAZy50 RepNo, AEV20975.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID129338
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyBacillaceae
GenusGeobacillus
SpeciesGeobacillus subterraneus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MLFQSPTLKT  CQVLVDEFRL  APQPFEPQKL  RFAGVGDRDV  YNISAPFADD  GELVIAGRVE60
SRDSEQSEVY  FFVERDGVWI  PREGAPVFAL  QDPFVARIHG  QLVFGGVETF  PHPVFDGEYC120
WRTVFYRGPN  IRGLKPFAQG  PDGMKDIRLV  ELKDGSIGVF  TRPQGEKGGR  GKIGFTRIFS180
LDDLTPDVIE  AAPLLDAQFT  DEEWGGVNEA  HLLANGLVGA  LGHIACFDEH  GNRHYYPMVF240
VLNPETMERS  ELELLALRSH  FLDGPAKRPD  LTNVVFSGGL  IRKGDGTAEL  YAGVGDAEAQ300
KISLIDPFVK  YEAQELDRMY  ASV323

Predicted 3D structure by AlphaFold2 with pLDDT = 94.99 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT108(24-308)

MLFQSPTLKT  CQVLVDEFRL  APQPFEPQKL  RFAGVGDRDV  YNISAPFADD  GELVIAGRVE60
SRDSEQSEVY  FFVERDGVWI  PREGAPVFAL  QDPFVARIHG  QLVFGGVETF  PHPVFDGEYC120
WRTVFYRGPN  IRGLKPFAQG  PDGMKDIRLV  ELKDGSIGVF  TRPQGEKGGR  GKIGFTRIFS180
LDDLTPDVIE  AAPLLDAQFT  DEEWGGVNEA  HLLANGLVGA  LGHIACFDEH  GNRHYYPMVF240
VLNPETMERS  ELELLALRSH  FLDGPAKRPD  LTNVVFSGGL  IRKGDGTAEL  YAGVGDAEAQ300
KISLIDPFVK  YEAQELDRMY  ASV323

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help