CAZyme3D

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Entry ID

Information for CAZyme ID: BBV40700.1

Basic Information

GenBank IDBBV40700.1
FamilyGH32
Sequence Length478
UniProt IDA0A7I7FKG0(100,100)Download
Average pLDDT?96.68
CAZy50 ID64075
CAZy50 RepNo, WEI57568.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1639133
KingdomBacteria
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter portucalensis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTSLLFKANE  ALSQQKDLVN  PRWYPRYHLA  PPAGWMNDPN  GLSWFDGYYH  AFYQHYPWQP60
VWGPMHWGHA  RSRDMVNWEH  LPIALAPEGP  EDKDGCFSGS  AVVEGNKLAL  IYTGHKFDGE120
AKEENLYQVQ  CLATSTDGIH  FERQGMILDT  PRGVHHFRDP  KVWQEGDSWY  MVVGARVDDV180
GEVQLYRSQD  LQHWQFASTL  GRADDGMGYM  WECPDLFPLN  DKLVFMFSPQ  GIAEDGYDCR240
NLFQSGYMVG  EWQDNLHFHV  THAFQEMDHG  HDFYAPQSFT  TPDGRRIVIG  WLSMWESPMP300
EQADGWAGML  TLPREVTLDT  DQRLRMNPIK  ELESLRGPLH  VWPVSELHNR  TLMVEEQAHA360
IEVELSLDIA  RSSAEEYGIA  LGDGMRIYVD  SQAQRLVLDR  RYPQHGLSGY  RSVPLPVGDR420
LDLRLFIDSS  SVEVFVNHGE  YTLSSRIYPE  PDDRQLTLFS  QNGHAIFNQG  QAWPLSAK478

Predicted 3D structure by AlphaFold2 with pLDDT = 96.68 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH32(28-327)

MTSLLFKANE  ALSQQKDLVN  PRWYPRYHLA  PPAGWMNDPN  GLSWFDGYYH  AFYQHYPWQP60
VWGPMHWGHA  RSRDMVNWEH  LPIALAPEGP  EDKDGCFSGS  AVVEGNKLAL  IYTGHKFDGE120
AKEENLYQVQ  CLATSTDGIH  FERQGMILDT  PRGVHHFRDP  KVWQEGDSWY  MVVGARVDDV180
GEVQLYRSQD  LQHWQFASTL  GRADDGMGYM  WECPDLFPLN  DKLVFMFSPQ  GIAEDGYDCR240
NLFQSGYMVG  EWQDNLHFHV  THAFQEMDHG  HDFYAPQSFT  TPDGRRIVIG  WLSMWESPMP300
EQADGWAGML  TLPREVTLDT  DQRLRMNPIK  ELESLRGPLH  VWPVSELHNR  TLMVEEQAHA360
IEVELSLDIA  RSSAEEYGIA  LGDGMRIYVD  SQAQRLVLDR  RYPQHGLSGY  RSVPLPVGDR420
LDLRLFIDSS  SVEVFVNHGE  YTLSSRIYPE  PDDRQLTLFS  QNGHAIFNQG  QAWPLSAK478

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help