CAZyme3D

You are here: Home Cite us: 2025

Entry ID

Information for CAZyme ID: BBT82606.1

Basic Information

GenBank IDBBT82606.1
FamilyCBM5, CBM73, GH18
Sequence Length731
UniProt IDA0A6S5X9K8(100,100)Download
Average pLDDT?83.57
CAZy50 ID34207
CAZy50 RepNo, QWK95133.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID654
KingdomBacteria
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAeromonadales
FamilyAeromonadaceae
GenusAeromonas
SpeciesAeromonas veronii

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MNKFKLSLLG  CLIGATSPML  HAATAGQSMV  NPQSGVVVGY  WHNWCGGAGY  QGGTAPCVKL60
DQVNPQYNVV  DVSFMKVYGS  NPIPTFKLDT  ATGMSESQFI  EQIAELNRQG  RAVLLALGGA120
DAHIELRTGQ  EQAFADEIIR  LVETYGFDGL  DIDLEQAAVT  AANNQTVIPA  ALRLVKDHYR180
AQGKNFLITM  APEFPYLTAN  GLYTPYLRAL  EGYYDWINPQ  FYNQGGDGIW  IDGIGWIAQN240
NDALKEEFIY  YIADSLINGT  RGYYKIPHDK  LVFGIPTNID  AAATGYVKNP  QDLFDAFNKL300
KNQGQPLRGV  MTWSINWDMG  RNAAGQSYNE  SFIKSYGPFI  HEQEITPPID  NGKPVFSGVS360
DTRIKQGTAF  DPLAGVTAND  KEDGDLTGQI  QVEGSVDSQR  IGLYPLTYKV  SDRDNNVTEQ420
VRSVEVYSMK  PVFSGVTDTT  LELGTAFDPM  TGVSAHDEED  GDLTAQIKVS  GSVDSNKVGR480
YTLTYQVSDS  AGQLVTQQRN  VTVKEQGAIC  ENSWDAKKVY  VGGDIVSHNG  KNWLAGWWTQ540
NEEPGTTGDW  GVWKVQGDSD  CDGGNKPPVI  NSSDFTVSAM  GSDYTIVDGQ  VSIRFNVTTA600
NPVQITATLE  QNGRSHGTTS  SKVNGTSTLV  LQGSNVTDGS  YDVVITGLAD  GQKPVVQRFP660
VTLAEESDNG  GNDGDYPAYA  PNTGYQAGDR  VSNAGGNYEC  KPWPYSGWCG  GSTSHYAPGT720
GSAWSDAWTK  L731

Predicted 3D structure by AlphaFold2 with pLDDT = 83.57 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH18(36-332)+CBM5(514-553)+CBM73(679-729)

MNKFKLSLLG  CLIGATSPML  HAATAGQSMV  NPQSGVVVGY  WHNWCGGAGY  QGGTAPCVKL60
DQVNPQYNVV  DVSFMKVYGS  NPIPTFKLDT  ATGMSESQFI  EQIAELNRQG  RAVLLALGGA120
DAHIELRTGQ  EQAFADEIIR  LVETYGFDGL  DIDLEQAAVT  AANNQTVIPA  ALRLVKDHYR180
AQGKNFLITM  APEFPYLTAN  GLYTPYLRAL  EGYYDWINPQ  FYNQGGDGIW  IDGIGWIAQN240
NDALKEEFIY  YIADSLINGT  RGYYKIPHDK  LVFGIPTNID  AAATGYVKNP  QDLFDAFNKL300
KNQGQPLRGV  MTWSINWDMG  RNAAGQSYNE  SFIKSYGPFI  HEQEITPPID  NGKPVFSGVS360
DTRIKQGTAF  DPLAGVTAND  KEDGDLTGQI  QVEGSVDSQR  IGLYPLTYKV  SDRDNNVTEQ420
VRSVEVYSMK  PVFSGVTDTT  LELGTAFDPM  TGVSAHDEED  GDLTAQIKVS  GSVDSNKVGR480
YTLTYQVSDS  AGQLVTQQRN  VTVKEQGAIC  ENSWDAKKVY  VGGDIVSHNG  KNWLAGWWTQ540
NEEPGTTGDW  GVWKVQGDSD  CDGGNKPPVI  NSSDFTVSAM  GSDYTIVDGQ  VSIRFNVTTA600
NPVQITATLE  QNGRSHGTTS  SKVNGTSTLV  LQGSNVTDGS  YDVVITGLAD  GQKPVVQRFP660
VTLAEESDNG  GNDGDYPAYA  PNTGYQAGDR  VSNAGGNYEC  KPWPYSGWCG  GSTSHYAPGT720
GSAWSDAWTK  L731

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help