CAZyme3D

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Entry ID

Information for CAZyme ID: BBS30911.1

Basic Information

GenBank IDBBS30911.1
FamilyCBM34, GH13_21
Sequence Length605
UniProt IDA0A6S5JH62(100,100)Download
Average pLDDT?94.34
CAZy50 ID45846
CAZy50 RepNo, AMO50316.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID550
KingdomBacteria
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEnterobacter
SpeciesEnterobacter cloacae

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MLNAWHLPVA  PFVKQNKDNL  VITLWLAGEN  QPERVTLRAE  IDNEETGLKM  HKLRSQPQPG60
ITAWRANIDL  RSGQPRRRYS  FKLLWNHRQL  WFTPQGFSRF  PPARLEQFAV  DYPDSGPQWV120
NDQVFYQIFP  DRFARSEKRT  ADQDKVYHHH  AAGHDIILKK  WDEPVTAQAG  GSTFYGGDLD180
GISEKLPYLK  KLGVTALYLN  PVFKAPSVHK  YDTQDYRHVD  AQFGGDEALL  RLRENTLKEG240
MRLILDGVFN  HSGDSHAWFD  RHNQSMGGAC  HNPDSPQRDW  YIFNEEGRAL  DWLGYPSLPK300
LDFQSSTLVN  EIYGGEDSIV  RHWLNAPWNM  DGWRLDVVHM  LGEAGGARNN  LQHVGGITRS360
AKAARPEAFV  FGEHFGDARQ  WLQNDAEDAA  MNYRGFTFPL  WGFLANTDIS  YDPNHIDAET420
CAAWMDNYRA  GLSHQQQLRM  FNQLDSHDTA  RFKSLLGKDV  ARLPLAVTWL  FTWPGVPCIY480
YGDEVGLDGN  NDPFCRKTFP  WAPEKQDKVL  FSLYQRLAKL  RKQSLALRYG  GCQVVYAHDN540
VVVFVRVYNQ  QRVLVAINRG  EACEVVLDDS  PLLKVAAWKN  KEGKATIQDG  VLALPAISAT600
IWVGS605

Predicted 3D structure by AlphaFold2 with pLDDT = 94.34 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM34(5-115)+GH13_21(177-491)

MLNAWHLPVA  PFVKQNKDNL  VITLWLAGEN  QPERVTLRAE  IDNEETGLKM  HKLRSQPQPG60
ITAWRANIDL  RSGQPRRRYS  FKLLWNHRQL  WFTPQGFSRF  PPARLEQFAV  DYPDSGPQWV120
NDQVFYQIFP  DRFARSEKRT  ADQDKVYHHH  AAGHDIILKK  WDEPVTAQAG  GSTFYGGDLD180
GISEKLPYLK  KLGVTALYLN  PVFKAPSVHK  YDTQDYRHVD  AQFGGDEALL  RLRENTLKEG240
MRLILDGVFN  HSGDSHAWFD  RHNQSMGGAC  HNPDSPQRDW  YIFNEEGRAL  DWLGYPSLPK300
LDFQSSTLVN  EIYGGEDSIV  RHWLNAPWNM  DGWRLDVVHM  LGEAGGARNN  LQHVGGITRS360
AKAARPEAFV  FGEHFGDARQ  WLQNDAEDAA  MNYRGFTFPL  WGFLANTDIS  YDPNHIDAET420
CAAWMDNYRA  GLSHQQQLRM  FNQLDSHDTA  RFKSLLGKDV  ARLPLAVTWL  FTWPGVPCIY480
YGDEVGLDGN  NDPFCRKTFP  WAPEKQDKVL  FSLYQRLAKL  RKQSLALRYG  GCQVVYAHDN540
VVVFVRVYNQ  QRVLVAINRG  EACEVVLDDS  PLLKVAAWKN  KEGKATIQDG  VLALPAISAT600
IWVGS605

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help