CAZyme3D

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Entry ID

Information for CAZyme ID: BBP09902.1

Basic Information

GenBank IDBBP09902.1
FamilyCBM41, CBM48, GH13_14
Sequence Length759
UniProt IDA0A6H3SJI8(100,100)Download
Average pLDDT?94.72
CAZy50 ID27862
CAZy50 RepNo, AYO47318.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2598453
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusStreptococcus
SpeciesStreptococcus sp. 116-D4

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MYNYPMRVHY  HRKNGEYDTC  SFVKSQDQRI  DFLTYKEDYF  GALFSFEHPS  SHALESLNFV60
VHTGQTSKEY  TIRFNHYPLL  TEVWILEGDD  RIYYSENPAI  ASPFYKNQNP  FAFDKAINSA120
SFDHHWGYQG  ELGCRVEDNE  AHFALWAPTA  TEVQVVVYES  AANDAPIWKT  FEMERGNSYS180
YNHKDNTIGV  WSLDVEEDLT  GKAYQYQVQF  PHHQTLTRDP  YTIATSPDGK  RSAILSFEEK240
QVENFEVKHG  SDATWRLANP  CKAVICEMHI  RDLTKSPTSG  VDEHLRGTFL  GAAQTGTVNQ300
YGQSTAFDYI  KKLGYNYVQL  QPIADRHKEY  DADGNVTYNW  GYDPQNYNAP  ETSLSTNPDD360
PAQVIRDLKT  MVQAYHDAGI  GVIVDVVYNH  TFSVVDAPFQ  TTVPDYYYRM  NLDGTFQNGT420
GVGNETASEH  EMFRKYMIDS  LLYWVQEYNI  DGFRFDLMGI  HDVKTMQMIR  QSLDEIDANI480
ILYGEGWDMG  TGLAPYDKAN  KDNAYQMPNI  GFFNDNQRDA  VKGGEVYGAI  KSGFVSGAAT540
EPILAKAILG  SSELGTYTHP  NQVLNYVEAH  DNYNLHDLLA  TLHPDQSSEQ  IMRKVETATA600
MNLLMQGMAF  MEIGQEFGRT  KLVATGENGE  LTHDDRERAM  NSYNAPDSVN  QVNWDLLNER660
QDSIDFIRQM  IRLKTETSAF  SYTTYDDIYH  HIFVHSAHEH  SGWLVYEIHG  EEHLLVVFNA720
KEQDFQFENA  GNLELLVTNS  HLADTDMVSG  VSASVFKVL759

Predicted 3D structure by AlphaFold2 with pLDDT = 94.72 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM41(6-96)+CBM48(130-223)+GH13_14(308-616)

MYNYPMRVHY  HRKNGEYDTC  SFVKSQDQRI  DFLTYKEDYF  GALFSFEHPS  SHALESLNFV60
VHTGQTSKEY  TIRFNHYPLL  TEVWILEGDD  RIYYSENPAI  ASPFYKNQNP  FAFDKAINSA120
SFDHHWGYQG  ELGCRVEDNE  AHFALWAPTA  TEVQVVVYES  AANDAPIWKT  FEMERGNSYS180
YNHKDNTIGV  WSLDVEEDLT  GKAYQYQVQF  PHHQTLTRDP  YTIATSPDGK  RSAILSFEEK240
QVENFEVKHG  SDATWRLANP  CKAVICEMHI  RDLTKSPTSG  VDEHLRGTFL  GAAQTGTVNQ300
YGQSTAFDYI  KKLGYNYVQL  QPIADRHKEY  DADGNVTYNW  GYDPQNYNAP  ETSLSTNPDD360
PAQVIRDLKT  MVQAYHDAGI  GVIVDVVYNH  TFSVVDAPFQ  TTVPDYYYRM  NLDGTFQNGT420
GVGNETASEH  EMFRKYMIDS  LLYWVQEYNI  DGFRFDLMGI  HDVKTMQMIR  QSLDEIDANI480
ILYGEGWDMG  TGLAPYDKAN  KDNAYQMPNI  GFFNDNQRDA  VKGGEVYGAI  KSGFVSGAAT540
EPILAKAILG  SSELGTYTHP  NQVLNYVEAH  DNYNLHDLLA  TLHPDQSSEQ  IMRKVETATA600
MNLLMQGMAF  MEIGQEFGRT  KLVATGENGE  LTHDDRERAM  NSYNAPDSVN  QVNWDLLNER660
QDSIDFIRQM  IRLKTETSAF  SYTTYDDIYH  HIFVHSAHEH  SGWLVYEIHG  EEHLLVVFNA720
KEQDFQFENA  GNLELLVTNS  HLADTDMVSG  VSASVFKVL759

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help