CAZyme3D

You are here: Home Cite us: 2025

Entry ID

Information for CAZyme ID: BBO31207.1

Basic Information

GenBank IDBBO31207.1
FamilyGH18
Sequence Length429
UniProt IDA0A5K7X5T0(100,100)Download
Average pLDDT?87.67
CAZy50 ID80225
CAZy50 RepNo, CDW92039.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2650471
KingdomBacteria
PhylumPlanctomycetota
ClassPlanctomycetia
OrderPirellulales
FamilyLacipirellulaceae
GenusLacipirellula
SpeciesLacipirellula parvula

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MAVVACTFHA  HDAVALDLIG  YLPNYRINAN  YIANTLPGQL  AMLDEIRYFG  ITVNGNGTLT60
TTAADLSNLQ  SIKSAIDALP  AAQRPRLGIT  IGGAGTSDGF  GPVAASSTLR  DQFAINLNAL120
LNQTGASAVD  LDWEHPSAGV  QRNTQFPAML  TRTKQELGAN  RRVYATVDPT  VMIPASTLTG180
ANAIDGVSLM  TYDLSWWAGD  PADQNLGQHS  LQEYVDASVK  AWTDAPGSPN  QRPWVFGTWG240
RGVAAAKLGA  GLPFYGRGFN  GSSADVAVTY  RDLATSGTTT  NGSDYVYNGS  NVWIPSLDMV300
EDRVEAAHAA  GLQHLIIWEL  AQDLAPTSAN  SMLRRAYETN  QSLSAVPGDF  DGDGAVGQLD360
LEIWKGAFNA  STTAGDANGD  ERSDGADFLI  WQRHATPTAP  TTAVPEPTSG  LLLAPSLLIY420
LARRHMLSQ429

Predicted 3D structure by AlphaFold2 with pLDDT = 87.67 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH18(18-333)

MAVVACTFHA  HDAVALDLIG  YLPNYRINAN  YIANTLPGQL  AMLDEIRYFG  ITVNGNGTLT60
TTAADLSNLQ  SIKSAIDALP  AAQRPRLGIT  IGGAGTSDGF  GPVAASSTLR  DQFAINLNAL120
LNQTGASAVD  LDWEHPSAGV  QRNTQFPAML  TRTKQELGAN  RRVYATVDPT  VMIPASTLTG180
ANAIDGVSLM  TYDLSWWAGD  PADQNLGQHS  LQEYVDASVK  AWTDAPGSPN  QRPWVFGTWG240
RGVAAAKLGA  GLPFYGRGFN  GSSADVAVTY  RDLATSGTTT  NGSDYVYNGS  NVWIPSLDMV300
EDRVEAAHAA  GLQHLIIWEL  AQDLAPTSAN  SMLRRAYETN  QSLSAVPGDF  DGDGAVGQLD360
LEIWKGAFNA  STTAGDANGD  ERSDGADFLI  WQRHATPTAP  TTAVPEPTSG  LLLAPSLLIY420
LARRHMLSQ429

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help