CAZyme3D

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Entry ID

Information for CAZyme ID: BBN45733.1

Basic Information

GenBank IDBBN45733.1
FamilyGT89
Sequence Length660
UniProt IDA0A5A4W4V2(100,100)Download
Average pLDDT?88.70
CAZy50 ID38741
CAZy50 RepNo, AEV72545.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID439334
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycobacterium
SpeciesMycobacterium avium

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MPSVSPELQA  LKARIMGSRP  VMRRPGWPVF  PYTTMVRSSL  WIGVAVVAVL  FAWGGWQRRW60
IADDGLIVLR  TVRNLLAGNG  PVFNQGERVE  ANTSTAWTYL  MYAGSWVGGP  LRMEYVALAL120
ALTLSVLGVA  LLMLGAARLY  APSLRGRRAI  MLPAGALVYI  ALPPSRDFAT  SGLESGLALA180
YLGLLWWMMV  CWAQPVRNRP  DRREFAGALA  FVAGFSVLVR  PELALMGGLA  LIMMLVAART240
WRRRALIVAA  GGALPVAYEI  FRMGYYGLLV  PGTALAKDAA  GDKWSQGMTY  LSNFDAPYLV300
WVPAVLLVLL  GVLLAAARRR  PSFLRPPLAP  NYGRVARAVH  SPPAVVAWVL  VSGLLQALYW360
IRQGGDFMHA  RVLLAPLFCL  LAPVAVVPVM  VPDGQDYSRE  TGNWVAGAAC  ALWLGIAGWA420
LWAANSPGMG  DDATHVTYSG  IVDERRFYAQ  ATGHAHPLTA  ADYLGYPRMA  AILTALNNTP480
EGALLLPSGN  YTQWDLVPMA  QPPPGTTPDK  FPQKPQHTVF  FTNLGMVGMN  VGLDVRVIDQ540
IGLANPLAQH  TERLKHGRIG  HDKNLFPDWV  IADGPWVKVY  PGIPGYLDAQ  WVAEAVSALQ600
CPDTRAVLAS  VRAPMTPHRF  LSNVLHSFQF  TGYRIDRVPR  YELARCGLPV  PEEAPPPPRE660
660

Predicted 3D structure by AlphaFold2 with pLDDT = 88.70 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT89(39-649)

MPSVSPELQA  LKARIMGSRP  VMRRPGWPVF  PYTTMVRSSL  WIGVAVVAVL  FAWGGWQRRW60
IADDGLIVLR  TVRNLLAGNG  PVFNQGERVE  ANTSTAWTYL  MYAGSWVGGP  LRMEYVALAL120
ALTLSVLGVA  LLMLGAARLY  APSLRGRRAI  MLPAGALVYI  ALPPSRDFAT  SGLESGLALA180
YLGLLWWMMV  CWAQPVRNRP  DRREFAGALA  FVAGFSVLVR  PELALMGGLA  LIMMLVAART240
WRRRALIVAA  GGALPVAYEI  FRMGYYGLLV  PGTALAKDAA  GDKWSQGMTY  LSNFDAPYLV300
WVPAVLLVLL  GVLLAAARRR  PSFLRPPLAP  NYGRVARAVH  SPPAVVAWVL  VSGLLQALYW360
IRQGGDFMHA  RVLLAPLFCL  LAPVAVVPVM  VPDGQDYSRE  TGNWVAGAAC  ALWLGIAGWA420
LWAANSPGMG  DDATHVTYSG  IVDERRFYAQ  ATGHAHPLTA  ADYLGYPRMA  AILTALNNTP480
EGALLLPSGN  YTQWDLVPMA  QPPPGTTPDK  FPQKPQHTVF  FTNLGMVGMN  VGLDVRVIDQ540
IGLANPLAQH  TERLKHGRIG  HDKNLFPDWV  IADGPWVKVY  PGIPGYLDAQ  WVAEAVSALQ600
CPDTRAVLAS  VRAPMTPHRF  LSNVLHSFQF  TGYRIDRVPR  YELARCGLPV  PEEAPPPPRE660
660

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help