Information for CAZyme ID: BBM46381.1
Basic Information
| GenBank ID | BBM46381.1 |
| Family | GH13_20 |
| Sequence Length | 1017 |
| UniProt ID | A0A510K6J0(100,100) |
| Average pLDDT? | 85.13 |
| CAZy50 ID | 13327 |
| CAZy50 Rep | No, ALA96410.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 109328 |
| Kingdom | Bacteria |
| Phylum | Fusobacteriota |
| Class | Fusobacteriia |
| Order | Fusobacteriales |
| Family | Leptotrichiaceae |
| Genus | Leptotrichia |
| Species | Leptotrichia trevisanii |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MGYKIVIYKD NKFYKEENLK QNWENFIYKW GNVESGSYFF EIKNEESGVI SGVTYSHTAP | 60 |
| FAKRFEAVVD DNLPPKSITG FQKGIDIYVE YYPSKKTISL TKMKFYRMNL DIADFGLEKA | 120 |
| DKVEIAGNFN NWKPDTEPIH HFEGTNYEVI LASPEGVYEY KYLIDGKWYP ENENKKLIIG | 180 |
| ENGALFPQGD LGTGKFVYEA IDKNTNLKAI VHNYDSLQYF NKLSDNEYEF KIRTQMNDVE | 240 |
| RAYISVVLHE EDNYEMIYEL ERYQDKTNGF DYFERIINFG KEAKKLLYYF ILEDNGSRAY | 300 |
| FNGKTLSYSK PKRLIVNTTS KDIQLFDVPN WAKEAIWYNI FPDRFYNGNH YNDPIFNEFG | 360 |
| PEAFKPNRLH EQNFIEDYRW EKSNNVIGQF DRNRWTADFR EQVVWEKLGE REIDYSLKYA | 420 |
| RMYGGDLQGI KEKIPYMKEL GINAVWLNPV FFSYQNHKYG ANDFRHISPD FGTIKTSGKT | 480 |
| HDVEINKNNK YGNKSYVDVL GNKASTSSEL KLLEVNLNGE NRGKNGYGET EDPSTWVWTE | 540 |
| SDLIMVDLIK EFHKNGIRVI FDGVFNHSSS EHWTFNMVLA DGENSKYKDW YKFTDFGQHV | 600 |
| PITDEMSKEQ AYETLIANRK RTIYNAWGGF DTLPEFNSFN QEYKEYIFNI TRKWMYGPDG | 660 |
| KESENWMEDD GIDGWRLDVP NCLENQNFWN EWREVVKGSK TDSYITAELW GNAAGDINGG | 720 |
| NKFDTVMNYE WLKTVIGFFV NQSREGGVRY KLKAQDFFNE LREKRTWYPY QALQASQNLN | 780 |
| GSHDTDRLYS RIVNDVIGRN LEEGKQLEKG YNGIRPDLAS NYHPNTTIDW RNSPIKPKDI | 840 |
| LKLISIFQMT YIGAPMLFYG DEVGMWGATD PYCRKPMLWK EFMYDDEKNP SHINQNEVYQ | 900 |
| QKVDSDLFEW YKKLIRIRLE NKTLVYGKFR EIFADNDREI IVYERVIEDH TIIVIINNSF | 960 |
| NSWENVEFET NYQDERFIDL VTEGRTFRTG STGKIKLDLK AKEGMILRKV RIDGDYE | 1017 |
Predicted 3D structure by AlphaFold2 with pLDDT = 85.13 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM34(225-331)+GH13_20(425-871)
| MGYKIVIYKD NKFYKEENLK QNWENFIYKW GNVESGSYFF EIKNEESGVI SGVTYSHTAP | 60 |
| FAKRFEAVVD DNLPPKSITG FQKGIDIYVE YYPSKKTISL TKMKFYRMNL DIADFGLEKA | 120 |
| DKVEIAGNFN NWKPDTEPIH HFEGTNYEVI LASPEGVYEY KYLIDGKWYP ENENKKLIIG | 180 |
| ENGALFPQGD LGTGKFVYEA IDKNTNLKAI VHNYDSLQYF NKLSDNEYEF KIRTQMNDVE | 240 |
| RAYISVVLHE EDNYEMIYEL ERYQDKTNGF DYFERIINFG KEAKKLLYYF ILEDNGSRAY | 300 |
| FNGKTLSYSK PKRLIVNTTS KDIQLFDVPN WAKEAIWYNI FPDRFYNGNH YNDPIFNEFG | 360 |
| PEAFKPNRLH EQNFIEDYRW EKSNNVIGQF DRNRWTADFR EQVVWEKLGE REIDYSLKYA | 420 |
| RMYGGDLQGI KEKIPYMKEL GINAVWLNPV FFSYQNHKYG ANDFRHISPD FGTIKTSGKT | 480 |
| HDVEINKNNK YGNKSYVDVL GNKASTSSEL KLLEVNLNGE NRGKNGYGET EDPSTWVWTE | 540 |
| SDLIMVDLIK EFHKNGIRVI FDGVFNHSSS EHWTFNMVLA DGENSKYKDW YKFTDFGQHV | 600 |
| PITDEMSKEQ AYETLIANRK RTIYNAWGGF DTLPEFNSFN QEYKEYIFNI TRKWMYGPDG | 660 |
| KESENWMEDD GIDGWRLDVP NCLENQNFWN EWREVVKGSK TDSYITAELW GNAAGDINGG | 720 |
| NKFDTVMNYE WLKTVIGFFV NQSREGGVRY KLKAQDFFNE LREKRTWYPY QALQASQNLN | 780 |
| GSHDTDRLYS RIVNDVIGRN LEEGKQLEKG YNGIRPDLAS NYHPNTTIDW RNSPIKPKDI | 840 |
| LKLISIFQMT YIGAPMLFYG DEVGMWGATD PYCRKPMLWK EFMYDDEKNP SHINQNEVYQ | 900 |
| QKVDSDLFEW YKKLIRIRLE NKTLVYGKFR EIFADNDREI IVYERVIEDH TIIVIINNSF | 960 |
| NSWENVEFET NYQDERFIDL VTEGRTFRTG STGKIKLDLK AKEGMILRKV RIDGDYE | 1017 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.